Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02387 and BL00555
See
DNA alignment /
Visit
BSNT_02387 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence pep-align/BSNT_02387___mobB.1.5803.seq
# -bsequence pep-align/BL00555___mobB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02387___mobB-BL00555___mobB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02387___mobB-BL00555___mobB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02387___mobB
# 2: BL00555___mobB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 89/180 (49.4%)
# Similarity: 119/180 (66.1%)
# Gaps: 12/180 ( 6.7%)
# Score: 458.0
#
#
#=======================================
BSNT_02387___ 1 MALVRPFPIVQVVGFQNSGKTTFIERILEKASEQGVHLGCLKHHGHGGEP 50
:...|||:|:||:||||||||:|::..|..:.||::||||||||||||
BL00555___mob 1 --MAAHFPILQIVGYQNSGKTTFVEKLAGKLDQLGVNVGCLKHHGHGGEP 48
BSNT_02387___ 51 QTLTEGKDTDRYKAAGADVTAVEGAGVLQLTARRNWDLARLIELYQFLET 100
....||||:||:..|||..:.||||||.|||||..|.|.:||..|..|..
BL00555___mob 49 DAFAEGKDSDRFFRAGAAASGVEGAGVFQLTARGEWTLDQLIAAYGVLAV 98
BSNT_02387___ 101 DCLLIEGFKKASYPKVVILSEKEDLEALQAVN-IIAIIYRKKEHMTEHQG 149
:||||||||.|.|.|||::..:.|...|:.:: |||:||::.|..|:
BL00555___mob 99 ECLLIEGFKHAPYQKVVMVRNEADCRLLKELDGIIAVIYQQSEPKTD--- 145
BSNT_02387___ 150 LPVFHADDPVAVDFVLSQLKGESA------ 173
:|.||.:||.|:.|:|:.||.|..
BL00555___mob 146 VPSFHIEDPGALAFILNHLKEEGVCLNDLS 175
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.