Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02380 and BL00552

See DNA alignment / Visit BSNT_02380 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence pep-align/BSNT_02380___yknT.1.5803.seq
#    -bsequence pep-align/BL00552___yknT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02380___yknT-BL00552___yknT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02380___yknT-BL00552___yknT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02380___yknT
# 2: BL00552___yknT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     168/327 (51.4%)
# Similarity:   225/327 (68.8%)
# Gaps:          15/327 ( 4.6%)
# Score: 788.0
# 
#
#=======================================

BSNT_02380___      1 -MKRSG--PFFHDVSQENLYLKSELSRCHKLIAELEASYFHQKNNKLLKE     47
                      .|.||  |:|.|:|||||:||:||:|.|:||.|||||||||||:||.:|
BL00552___ykn      1 MKKTSGSLPYFQDLSQENLFLKAELARSHQLIHELEASYFHQKNHKLSRE     50

BSNT_02380___     48 NTDMKEKLQQLSAELTHMSTKEKHASHTSQTLHQIRAELLDKIVVLQELL     97
                     |..||::|||||.||..:|..::..|  ::||::|::|||.|||||||||
BL00552___ykn     51 NAAMKQQLQQLSFELERISANKEDKS--AETLNRIKSELLSKIVVLQELL     98

BSNT_02380___     98 SAETFKRRAEIEEKHKLHIAKVKIEEENKNLHKRISELQASIEQEQNALL    147
                     ..||:.|:.||||||:||:..||.|||.|:||.:|...:...|:|:.  |
BL00552___ykn     99 QKETYARKQEIEEKHRLHLTNVKAEEEKKSLHSQIEYEKLHAEREKT--L    146

BSNT_02380___    148 QAKQQAELIKA--ENGRLKKQMVEKEYQLKHIKIEVDHMKDRIIETKERL    195
                     :.|::.||..|  ||.|||.::..|..|||.|:.:|..:|:|:.|||.||
BL00552___ykn    147 REKKEQELKNAAYENARLKDELHAKSLQLKQIETDVAVLKERVTETKSRL    196

BSNT_02380___    196 LDIEKTKEKLFHETIISYKRQLDESDAWIASHFADIDGGTKQKEKTEEEA    245
                     |:.|||||.||:|||:||||||||||.|||||||||| ..:|.||..|:.
BL00552___ykn    197 LEAEKTKEALFYETILSYKRQLDESDKWIASHFADID-AFQQTEKALEQN    245

BSNT_02380___    246 PAVYAQPNHVETILEDVTKQIHVLQKQLARAQSSDQAKSHTIEELKNRAA    295
                     ..|:.:...:|.:|:.||:|:..||:||:..|.:|......|.|.|.:|.
BL00552___ykn    246 EEVFERTEQIEAVLQTVTEQVDQLQQQLSAIQQNDTKMDQKITEWKKQAK    295

BSNT_02380___    296 EEKPYQKWVYKL-NLEKENKPSQKKPQ    321
                     ||.|.|||||:: ..:||.||..    
BL00552___ykn    296 EETPPQKWVYQIKRKDKETKPLN----    318


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