Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06136 and BL00549
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence pep-align/BSNT_06136___yxaD.1.5803.seq
# -bsequence pep-align/BL00549___yxaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06136___yxaD-BL00549___yxaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06136___yxaD-BL00549___yxaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06136___yxaD
# 2: BL00549___yxaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity: 55/147 (37.4%)
# Similarity: 82/147 (55.8%)
# Gaps: 9/147 ( 6.1%)
# Score: 238.5
#
#
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BSNT_06136___ 1 MQNQNPVELIEYELTTFIR-RAVYLDQSEKRTGNLERSSYLLLRQLDEFG 49
...:.:..||.|:...:| ...| ..|.|:|:||.||||.:||:..
BL00549___yxa 1 -MGHDSLRNIEKEIALLVRLTTAY----SPRFGSLDRSEYLLLSELDKQS 45
BSNT_06136___ 50 PARVKELAESFKLDISTLSRQAAALEAKELIYRFSDPSDGRVSLFTITKL 99
|..:..|||:..|::||.|||.:|||.|:||.||.||::||:||..:|..
BL00549___yxa 46 PLAINSLAETLMLNLSTASRQVSALERKKLIRRFPDPNNGRISLVEMTSE 95
BSNT_06136___ 100 GKQLLKADQQKRLERYEQMLKEWSTQEKEMFGELLQRMNKAFID--- 143
|...||..|:.|...|.::|::|:|:|.......|.|:|:.|..
BL00549___yxa 96 GIDALKKVQKARYHVYTEVLQDWTTEELNTLETRLIRLNQDFKKWSK 142
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