Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06136 and BL00549

See DNA alignment / Visit BSNT_06136 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence pep-align/BSNT_06136___yxaD.1.5803.seq
#    -bsequence pep-align/BL00549___yxaD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06136___yxaD-BL00549___yxaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06136___yxaD-BL00549___yxaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06136___yxaD
# 2: BL00549___yxaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:      55/147 (37.4%)
# Similarity:    82/147 (55.8%)
# Gaps:           9/147 ( 6.1%)
# Score: 238.5
# 
#
#=======================================

BSNT_06136___      1 MQNQNPVELIEYELTTFIR-RAVYLDQSEKRTGNLERSSYLLLRQLDEFG     49
                      ...:.:..||.|:...:| ...|    ..|.|:|:||.||||.:||:..
BL00549___yxa      1 -MGHDSLRNIEKEIALLVRLTTAY----SPRFGSLDRSEYLLLSELDKQS     45

BSNT_06136___     50 PARVKELAESFKLDISTLSRQAAALEAKELIYRFSDPSDGRVSLFTITKL     99
                     |..:..|||:..|::||.|||.:|||.|:||.||.||::||:||..:|..
BL00549___yxa     46 PLAINSLAETLMLNLSTASRQVSALERKKLIRRFPDPNNGRISLVEMTSE     95

BSNT_06136___    100 GKQLLKADQQKRLERYEQMLKEWSTQEKEMFGELLQRMNKAFID---    143
                     |...||..|:.|...|.::|::|:|:|.......|.|:|:.|..   
BL00549___yxa     96 GIDALKKVQKARYHVYTEVLQDWTTEELNTLETRLIRLNQDFKKWSK    142


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