Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02007 and BL00545
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence pep-align/BSNT_02007.1.5803.seq
# -bsequence pep-align/BL00545.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02007-BL00545.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02007-BL00545.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02007
# 2: BL00545
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity: 69/272 (25.4%)
# Similarity: 77/272 (28.3%)
# Gaps: 185/272 (68.0%)
# Score: 316.0
#
#
#=======================================
BSNT_02007 1 MHYLAEHQTFDSTDQLNESVYEHIKRNTYELNDTD--------------- 35
||||||||||.||.:||.:||||||||||||||||
BL00545 1 MHYLAEHQTFASTAELNAAVYEHIKRNTYELNDTDRLTLKTIARYAVKFA 50
BSNT_02007 36 ---------------------RRALNKLAGLGIVKKVATTRKINGGKGAN 64
|||:||||.|.|::|||||||||||.|||
BL00545 51 GAAHLKAETLADLIGKSVKTARRAVNKLASLSIIQKVATTRKINGGHGAN 100
BSNT_02007 65 IIVILPVNNASE----AEDDQSTMSNR----------------------- 87
|||||||.:..| :|||||||:.|
BL00545 101 IIVILPVGSRVEDMQLSEDDQSTMTTRGDAEKPSEPTDESPKTTNEPSDS 150
BSNT_02007 87 -------------------------------------------------- 87
BL00545 151 INLSKNHVIDTVPACGLKNALPSEIYSAMARYFEADEIYKYYGILLRAKA 200
BSNT_02007 87 -------------------------------------------------- 87
BL00545 201 SVDPTLILEEHPQPFVEAWHAAILKRKQQKIRRFDDYLYASFRQAAWTVK 250
BSNT_02007 87 ---------------------- 87
BL00545 251 ARENRVKNVGLLAEFETFLQAE 272
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