Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05221 and BL00542

See DNA alignment / Visit BSNT_05221 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:20
# Commandline: needle
#    -asequence pep-align/BSNT_05221.1.5803.seq
#    -bsequence pep-align/BL00542___xlyB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05221-BL00542___xlyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05221-BL00542___xlyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05221
# 2: BL00542___xlyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     259/316 (82.0%)
# Similarity:   268/316 (84.8%)
# Gaps:          28/316 ( 8.9%)
# Score: 1319.5
# 
#
#=======================================

BSNT_05221         1 ----------------------MDAKYITFHNTANDASADAEIRYMIGNN     28
                                           |||||||||||||||||..||.|||.||
BL00542___xly      1 MAISVKKNLVASSKYSVKCPYSMDAKYITFHNTANDASAANEIAYMIRNN     50

BSNT_05221        29 NEVSYHFAVDDKEVVQGIPTDRNAWHTGDGSGSNSGNRTSIGVEVCYSKS     78
                     |:||||||||||||||||||:|||||.||.:|  .|||:|||||||||||
BL00542___xly     51 NQVSYHFAVDDKEVVQGIPTNRNAWHCGDENG--PGNRSSIGVEVCYSKS     98

BSNT_05221        79 GGAKYKAAEKLAIKFIAQLLKERGWGVDRVRKHQDWSGKYCPHRVLAEGR    128
                     ||||||||||||||||||||.|||||||||:|||||||||||||||.|||
BL00542___xly     99 GGAKYKAAEKLAIKFIAQLLTERGWGVDRVKKHQDWSGKYCPHRVLDEGR    148

BSNT_05221       129 WESVKAAIAAELKALGGKSTSSSSAKKSAPKASGSTYTVKKGDTLSEIAE    178
                     |.:|||||||||||||||   |||..||||||||.||||||||||||||.
BL00542___xly    149 WGAVKAAIAAELKALGGK---SSSPAKSAPKASGKTYTVKKGDTLSEIAV    195

BSNT_05221       179 KTGVSVTKLQSYNGIKNANKITVGQVLKLKGG-SSKPSSGGKKYVYLPAS    227
                     ||||||.||||||||||.|||.|||||||.|. ||||||.||||||||||
BL00542___xly    196 KTGVSVAKLQSYNGIKNPNKIMVGQVLKLTGSVSSKPSSSGKKYVYLPAS    245

BSNT_05221       228 ADSWRIYPTNKAPVKGNECGYLRPQKFGGLKYEVLANPQTDVYTIKTDQF    277
                     ||||||||||||||||||||:|||:||||||||:||||||||||||||||
BL00542___xly    246 ADSWRIYPTNKAPVKGNECGFLRPKKFGGLKYEILANPQTDVYTIKTDQF    295

BSNT_05221       278 GKVNIYAAKSTGATIK    293
                     ||||||||||||||||
BL00542___xly    296 GKVNIYAAKSTGATIK    311


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