Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05221 and BL00542
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence dna-align/BSNT_05221.1.5803.seq
# -bsequence dna-align/BL00542___xlyB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05221-BL00542___xlyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05221-BL00542___xlyB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05221
# 2: BL00542___xlyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 956
# Identity: 713/956 (74.6%)
# Similarity: 713/956 (74.6%)
# Gaps: 94/956 ( 9.8%)
# Score: 2869.5
#
#
#=======================================
BSNT_05221 0 -------------------------------------------------- 0
BL00542___xly 1 ATGGCGATTTCAGTCAAGAAAAACCTCGTCGCGTCAAGTAAGTATTCCGT 50
BSNT_05221 1 ----------------ATGGATGCGAAATACATTACGTTCCACAATACGG 34
|||||||||||.|||||.|||||.||||||||||
BL00542___xly 51 TAAGTGTCCGTATTCAATGGATGCGAAGTACATCACGTTTCACAATACGG 100
BSNT_05221 35 CGAACGACGCATCAGCGGACGCA-GAGATTCGGTATATGATCGGAAACAA 83
||||||||||.|||||.| ||.| ||.|||..|||.||||||.|.||.||
BL00542___xly 101 CGAACGACGCTTCAGCAG-CGAATGAAATTGCGTACATGATCCGCAATAA 149
BSNT_05221 84 CAACGAAGTATCTTACCATTTCGCGGTGGACGATAAGGAAGTCGTTCAAG 133
||||.|||||||.||.||.||.|||||.||||||||.||.||||||||.|
BL00542___xly 150 CAACCAAGTATCGTATCACTTTGCGGTAGACGATAAAGAGGTCGTTCAGG 199
BSNT_05221 134 GAATTCCGACGGATCGTAACGCGTGGCATACCGGAGACGGTAGCGGATCA 183
|.||||||||..|.||||||||.||||||..||||||||..|.||||
BL00542___xly 200 GGATTCCGACAAACCGTAACGCATGGCATTGCGGAGACGAAAACGGA--- 246
BSNT_05221 184 AATTCCGGAAACCGTACGTCTATCGGCGTAGAGGTTTGTTATTCGAAATC 233
.||||.||||||.|.|||||||||||.||||||||.|||||||||||
BL00542___xly 247 ---CCCGGCAACCGTTCATCTATCGGCGTCGAGGTTTGCTATTCGAAATC 293
BSNT_05221 234 AGGAGGCGCTAAGTACAAAGCGGCCGAAAAGCTGGCGATTAAGTTTATTG 283
|||.|||||||||||.||||||||||||||.||.||||||||.||.||.|
BL00542___xly 294 AGGCGGCGCTAAGTATAAAGCGGCCGAAAAACTTGCGATTAAATTCATCG 343
BSNT_05221 284 CGCAACTGTTAAAAGAGCGCGGCTGGGGCGTTGATCGTGTCCGAAAGCAC 333
|.||.||.||||.||||||||||||||||||||||||.||....|||||.
BL00542___xly 344 CTCAGCTATTAACAGAGCGCGGCTGGGGCGTTGATCGCGTTAAGAAGCAT 393
BSNT_05221 334 CAGGATTGGTCCGGCAAATATTGTCCGCATCGCGTGCTCGCTGAAGGACG 383
|||||||||..|||.|||||.||.|||||.||.||.||||.|||.||.||
BL00542___xly 394 CAGGATTGGAGCGGAAAATACTGCCCGCACCGTGTACTCGATGAGGGGCG 443
BSNT_05221 384 TTGGGAATCTGTAAAGGCGGCAATCGCGGCGGAACTTAAAGCGCTCGGCG 433
|||||...|.|||||.|||||.|||||.||||||.|.|||||||||||.|
BL00542___xly 444 TTGGGGTGCGGTAAAAGCGGCCATCGCTGCGGAATTGAAAGCGCTCGGAG 493
BSNT_05221 434 GAAAATCAACGTCATCTTCATCC--GCGAAGAAATCAGCGCCAAAAGCTT 481
|||| |||.||| |.|| || |||||||||.||.|||||.|
BL00542___xly 494 GAAA------GTCGTCT--AGCCCTGC---GAAATCAGCACCGAAAGCAT 532
BSNT_05221 482 CCGGGTCTACTTATACCGTCAAGAAAGGCGACACACTTTCCGAAATAGCG 531
||||....||.||||||||.||||||||||||||.|||||.|||||.|||
BL00542___xly 533 CCGGTAAGACGTATACCGTAAAGAAAGGCGACACGCTTTCGGAAATCGCG 582
BSNT_05221 532 GAGAAAACAGGCGTAAGTGTAACGAAGCTTCAATCGTACAACGGCATCAA 581
|..|||||||||||.|||||..||||.||.||.||.||.|||||.||.||
BL00542___xly 583 GTTAAAACAGGCGTTAGTGTGGCGAAACTCCAGTCCTATAACGGTATTAA 632
BSNT_05221 582 GAACGCGAATAAAATTACGGTCGGCCAGGTGCTCAAACTTAAAGGCGGAT 631
.||..||||||||||.|.||||||.||||||||.||.||||..||| |.
BL00542___xly 633 AAATCCGAATAAAATCATGGTCGGTCAGGTGCTGAAGCTTACGGGC--AG 680
BSNT_05221 632 CG-----TCTAAGCCGTCGTCCGGCGGTAAGAAATACGTCTACCTTCCGG 676
|| ||.||.|||||.||..||||||||||||||||.||.|||||||
BL00542___xly 681 CGTTAGTTCCAAACCGTCCTCTAGCGGTAAGAAATACGTATATCTTCCGG 730
BSNT_05221 677 CTTCGGCCGATTCTTGGCGTATCTATCCGACTAACAAAGCGCCGGTTAAA 726
|.||.|||||.||.|||||.||||||||||||||||||||||||||.||.
BL00542___xly 731 CATCTGCCGACTCATGGCGCATCTATCCGACTAACAAAGCGCCGGTCAAG 780
BSNT_05221 727 GGAAATGAATGCGGCTACTTGCGCCCTCAGAAATTTGGCGGTCTGAAGTA 776
||.||.||.|||||.|...||||.||..|||||||||||||.||.||.||
BL00542___xly 781 GGGAACGAGTGCGGATTTCTGCGTCCGAAGAAATTTGGCGGCCTTAAATA 830
BSNT_05221 777 CGAAGTCCTTGCGAACCCACAAACGGACGTCTATACGATCAAAACGGATC 826
||||.||||||||||.||.|||||||||||||||||||||||||||||||
BL00542___xly 831 CGAAATCCTTGCGAATCCCCAAACGGACGTCTATACGATCAAAACGGATC 880
BSNT_05221 827 AGTTCGGAAAAGTAAATATCTATGCTGCGAAATCAACCGGCGCAACAATA 876
|||||||||||||.||||||||.||.||||||||||||||||||||.||.
BL00542___xly 881 AGTTCGGAAAAGTGAATATCTACGCGGCGAAATCAACCGGCGCAACTATT 930
BSNT_05221 877 AAATAA 882
||.|||
BL00542___xly 931 AAGTAA 936
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