Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00066 and BL00538

See DNA alignment / Visit BSNT_00066 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence pep-align/BSNT_00066___yabA.1.5803.seq
#    -bsequence pep-align/BL00538___yabA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00066___yabA-BL00538___yabA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00066___yabA-BL00538___yabA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00066___yabA
# 2: BL00538___yabA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:      98/120 (81.7%)
# Similarity:   111/120 (92.5%)
# Gaps:           1/120 ( 0.8%)
# Score: 524.0
# 
#
#=======================================

BSNT_00066___      1 MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRK     50
                     |||||||||||:||||||||||||||||||||||||||:||||||:||||
BL00538___yab      1 MDKKELFDTVISLEEQIGSLYRQLGDLKQHIGEMIEENNHLQLENEHLRK     50

BSNT_00066___     51 RLDDTTQQIEKFKADKKESKTQKTEQTDIGEGYDNLARLYQEGFHICNVH    100
                     ||::|.|:::..|:|:||.|.:||...|||||:|||||||||||||||:|
BL00538___yab     51 RLEETDQRLKSVKSDEKEIKAEKTGHADIGEGHDNLARLYQEGFHICNIH    100

BSNT_00066___    101 YGSVRKE-DCLFCLSFLNKK    119
                     ||||||| ||||||||||||
BL00538___yab    101 YGSVRKEGDCLFCLSFLNKK    120


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