Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00087 and BL00520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:45
# Commandline: needle
# -asequence pep-align/BSNT_00087___gcaD.1.5803.seq
# -bsequence pep-align/BL00520___gcaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00087___gcaD-BL00520___gcaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00087___gcaD-BL00520___gcaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00087___gcaD
# 2: BL00520___gcaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity: 385/456 (84.4%)
# Similarity: 423/456 (92.8%)
# Gaps: 0/456 ( 0.0%)
# Score: 2007.0
#
#
#=======================================
BSNT_00087___ 1 MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDEALKLSLSKLV 50
|||||||||||||||||||||||||||||||||||||||||.||||.|||
BL00520___gca 1 MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDEARKLSLEKLV 50
BSNT_00087___ 51 TIVGHGAEEVKKQLGDKSEYALQAEQLGTAHAVKQAQPFLADEKGVTIVI 100
||||||||:||||||:||||||||||||||||||||:..|..|||.||||
BL00520___gca 51 TIVGHGAEDVKKQLGEKSEYALQAEQLGTAHAVKQAKSILGSEKGTTIVI 100
BSNT_00087___ 101 CGDTPLLTAETMEQMLKEHAQREAKATILTAVAEDPTGYGRIIRSENGAV 150
|||||||||||||.||.||.::.||.||||||||||||||||||:|||.|
BL00520___gca 101 CGDTPLLTAETMEAMLTEHQKKAAKVTILTAVAEDPTGYGRIIRNENGDV 150
BSNT_00087___ 151 QKIVEHKDASEEERLVTEINTGTYCFDNEALFRAIDQVSNDNAQGEYYLP 200
.||||||||:||||||.|||||||||||||||:.|:||||||.|||||||
BL00520___gca 151 AKIVEHKDATEEERLVKEINTGTYCFDNEALFQTIEQVSNDNVQGEYYLP 200
BSNT_00087___ 201 DVIEILKNEGETVAAYQTGNFQETLGVNDRVALSQAEQFMKERINKRHMQ 250
||||||||:|||||||||.||||||||||||||||||.:||:||||||||
BL00520___gca 201 DVIEILKNQGETVAAYQTVNFQETLGVNDRVALSQAEIYMKQRINKRHMQ 250
BSNT_00087___ 251 NGVTLIDPMNTYISPDAVIGSDTVIYPGTVIKGEVQIGEDTIIGPHTEIM 300
|||:||||.||||||:||||.||||||||||||.|.||||.:||.::|:.
BL00520___gca 251 NGVSLIDPDNTYISPEAVIGRDTVIYPGTVIKGRVVIGEDAVIGQNSELE 300
BSNT_00087___ 301 NSAIGSRTVIKQSVVNHSKVGNDVNIGPFAHIRPDSVIGNEVKIGNFVEI 350
||.:||||||||||:..|:||:||.|||||||||||.|||||:||||||:
BL00520___gca 301 NSTVGSRTVIKQSVIVDSEVGDDVTIGPFAHIRPDSKIGNEVRIGNFVEV 350
BSNT_00087___ 351 KKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGKNKYLTKIEDG 400
||::||||||||||||:||||:||||||||||||||||||:|:.||||:|
BL00520___gca 351 KKSEFGDRSKASHLSYIGDAEIGTDVNLGCGSITVNYDGKHKFKTKIENG 400
BSNT_00087___ 401 AFIGCNSNLVAPVTVGEGAYVAAGSTVTEDVPGKALAIARARQVNKDDYV 450
||||||||||||||:|||||||||||:|:||||:||:|||||||||:||.
BL00520___gca 401 AFIGCNSNLVAPVTIGEGAYVAAGSTITDDVPGRALSIARARQVNKEDYA 450
BSNT_00087___ 451 KNIHKK 456
:|||||
BL00520___gca 451 ENIHKK 456
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