Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00088 and BL00519
See
DNA alignment /
Visit
BSNT_00088 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:45
# Commandline: needle
# -asequence pep-align/BSNT_00088___prs.1.5803.seq
# -bsequence pep-align/BL00519___prs.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00088___prs-BL00519___prs.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00088___prs-BL00519___prs.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00088___prs
# 2: BL00519___prs
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity: 283/317 (89.3%)
# Similarity: 301/317 (95.0%)
# Gaps: 1/317 ( 0.3%)
# Score: 1433.0
#
#
#=======================================
BSNT_00088___ 1 MSNQYGDKNLKIFSLNSNPELAKEIADIVGVQLGKCSVTRFSDGEVQINI 50
.::|.|.|||||||||||.|||||||||||:|||.||.|||||||||||
BL00519___prs 1 -MSKYEDDNLKIFSLNSNPGLAKEIADIVGVELGKSSVKRFSDGEVQINI 49
BSNT_00088___ 51 EESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGY 100
||||||||||:|||||.|||||||||||||||||||||||||||:|||||
BL00519___prs 50 EESIRGCDCYVIQSTSAPVNEHIMELLIMVDALKRASAKTINIVMPYYGY 99
BSNT_00088___ 101 ARQDRKARSREPITAKLFANLLETAGATRVIALDLHAPQIQGFFDIPIDH 150
|||||||||||||||||.||||||||||||||||||||||||||||||||
BL00519___prs 100 ARQDRKARSREPITAKLVANLLETAGATRVIALDLHAPQIQGFFDIPIDH 149
BSNT_00088___ 151 LMGVPILGEYFEGKNLEDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRR 200
||||||||.|||.||.:|||||||||||||||||||||||||||||||||
BL00519___prs 150 LMGVPILGNYFEEKNFKDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRR 199
BSNT_00088___ 201 PRPNVAEVMNIVGNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYA 250
|:|||||||||:|:||||||||||||||||||||||||||||:||:||||
BL00519___prs 200 PKPNVAEVMNIIGHIEGKTAILIDDIIDTAGTITLAANALVESGAEEVYA 249
BSNT_00088___ 251 CCTHPVLSGPAVERINNSTIKELVVTNSIKLPEEKKIERFRQLSVGPLLA 300
|||||||||||:|||:||.||||||||||:|||||||.:|:||||.||||
BL00519___prs 250 CCTHPVLSGPAIERIDNSKIKELVVTNSIELPEEKKIAKFKQLSVAPLLA 299
BSNT_00088___ 301 EAIIRVHEQQSVSYLFS 317
||||||||:||||:||.
BL00519___prs 300 EAIIRVHEKQSVSFLFD 316
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.