Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00088 and BL00519
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:45
# Commandline: needle
# -asequence dna-align/BSNT_00088___prs.1.5803.seq
# -bsequence dna-align/BL00519___prs.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00088___prs-BL00519___prs.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00088___prs-BL00519___prs.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00088___prs
# 2: BL00519___prs
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 960
# Identity: 766/960 (79.8%)
# Similarity: 766/960 (79.8%)
# Gaps: 15/960 ( 1.6%)
# Score: 3040.0
#
#
#=======================================
BSNT_00088___ 1 ATGTCTAATCAATACGGAGATAAGAATTTAAAGATTTTTTCTTTGAATTC 50
||||||| ||||.|.|||..|.|||||.||||||||||||||.||.||
BL00519___prs 1 ATGTCTA---AATATGAAGACGACAATTTGAAGATTTTTTCTTTAAACTC 47
BSNT_00088___ 51 GAATCCAGAGCTTGCAAAAGAAATCGCAGATATAGTTGGAGTTCAATTAG 100
.|||||.|..|||||.||.||||||||.|||||.||.||||||.|..| |
BL00519___prs 48 AAATCCGGGTCTTGCGAAGGAAATCGCGGATATCGTCGGAGTTGAGCT-G 96
BSNT_00088___ 101 GGAAA-TGTTCTGTCACAAGATTTAGTGACGGGGAAGTCCAAATTAATAT 149
||||| .|||||||.|.|.|.|||||.|||||.||||||||||||||.||
BL00519___prs 97 GGAAAGAGTTCTGTTAAACGCTTTAGCGACGGTGAAGTCCAAATTAACAT 146
BSNT_00088___ 150 CGAAGAAAGTATTCGCGGATGTGATTGTTACATCATCCAGTCTACAAGTG 199
.||||||||.||.|||||.||.||.||.||..|||||||.||.||.||.|
BL00519___prs 147 TGAAGAAAGCATCCGCGGCTGCGACTGCTATGTCATCCAATCGACTAGCG 196
BSNT_00088___ 200 ACCCCGTTAACGAGCATATTATGGAACTGCTGATTATGGTAGATGCGTTA 249
..||.||.|||||||||||.|||||.||..||||.|||||.||||||.|.
BL00519___prs 197 CGCCGGTGAACGAGCATATCATGGAGCTTTTGATCATGGTGGATGCGCTG 246
BSNT_00088___ 250 AAACGCGCTTCTGCAAAAACGATTAACATTGTTATTCCTTATTACGGTTA 299
||||||||.||.||.|||||||||||.||.||.||.|||||.|||||.||
BL00519___prs 247 AAACGCGCGTCGGCGAAAACGATTAATATCGTGATGCCTTACTACGGCTA 296
BSNT_00088___ 300 TGCGCGTCAAGACAGAAAAGCAAGATCCCGTGAGCCAATCACAGCTAAAC 349
|||.|||||.|||.|.|||||..|.|||||.|||||.||||||||.||||
BL00519___prs 297 TGCCCGTCAGGACCGTAAAGCGCGTTCCCGCGAGCCGATCACAGCCAAAC 346
BSNT_00088___ 350 TTTTCGCTAACCTGCTTGAAACAGCCGGTGCGACTCGTGTGATTGCACTT 399
|..|.||.||.|||||.|||||.|||||.||.||.|||||||||||||||
BL00519___prs 347 TCGTGGCAAATCTGCTGGAAACCGCCGGAGCTACCCGTGTGATTGCACTT 396
BSNT_00088___ 400 GACCTGCATGCGCCGCAAATTCAAGGATTCTTTGATATACCGATTGACCA 449
|||||.||.|||||||||||.|||||.|||||||||||||||||.||.||
BL00519___prs 397 GACCTTCACGCGCCGCAAATCCAAGGTTTCTTTGATATACCGATCGATCA 446
BSNT_00088___ 450 CTTAATGGGTGTTCCGATTTTAGGAGAATATTTTGAAGGCAAAAATCTTG 499
.||||||||||||||||||||||||.|.||||||||||..|||||| ||.
BL00519___prs 447 TTTAATGGGTGTTCCGATTTTAGGAAATTATTTTGAAGAGAAAAAT-TTC 495
BSNT_00088___ 500 AA-GATATCGTCATTGTTTCACCAGACCATGGCGGTGTGACACGTGCCCG 548
|| ||||||||.|||||.||.||.|||||.|||||||||||.||||||||
BL00519___prs 496 AAGGATATCGTGATTGTGTCCCCTGACCACGGCGGTGTGACCCGTGCCCG 545
BSNT_00088___ 549 CAAACTGGCTGACCGACTAAAAGCGCCAATTGCGATTATCGATAAACGCC 598
||||.||||.|||||..|.||||||||.||||||||||||||.|||||||
BL00519___prs 546 CAAATTGGCGGACCGCTTGAAAGCGCCGATTGCGATTATCGACAAACGCC 595
BSNT_00088___ 599 GTCCGCGTCCAAACGTGGCGGAAGTCATGAATATTGTAGGTAACATCGAA 648
|.||....||.||.||.||.||.||.||||||||..|.||..|.||||||
BL00519___prs 596 GACCTAAGCCGAATGTAGCCGAGGTTATGAATATCATCGGGCATATCGAA 645
BSNT_00088___ 649 GGGAAGACTGCTATCCTCATCGATGACATTATTGATACTGCAGGTACGAT 698
||.||.||.||.||..|.||.|||||.|||||||||||||||||.|||||
BL00519___prs 646 GGAAAAACAGCCATTTTAATTGATGATATTATTGATACTGCAGGAACGAT 695
BSNT_00088___ 699 TACACTTGCTGCTAATGCGCTCGTTGAAAACGGAGCGAAAGAAGTATATG 748
|||.||.||.||.||||||||||||||||.|||.||..|.|||||.||||
BL00519___prs 696 TACGCTGGCGGCCAATGCGCTCGTTGAAAGCGGCGCAGAGGAAGTGTATG 745
BSNT_00088___ 749 CATGCTGTACACACCCTGTACTATCAGGCCCTGCGGTAGAACGGATTAAT 798
|||||||||||||.||.||.||.||.||.||.|||.|.|||.|.||..|.
BL00519___prs 746 CATGCTGTACACATCCGGTTCTTTCCGGTCCGGCGATCGAAAGAATCGAC 795
BSNT_00088___ 799 AATTCAACAATTAAAGAGCTTGTTGTGACAAACAGCATCAAGCTTCCCGA 848
|||||.|.||||||||||||.||||||||.||||||||..|||||||.||
BL00519___prs 796 AATTCCAAAATTAAAGAGCTCGTTGTGACCAACAGCATTGAGCTTCCTGA 845
BSNT_00088___ 849 AGAAAAGAAAATTGAACGC----TTTAGGCAGCTTTCAGTCGGACCGCTT 894
|||||||||||| ||| ||.|.|||||||||.||||.|||||||
BL00519___prs 846 AGAAAAGAAAAT----CGCGAAATTCAAGCAGCTTTCTGTCGCACCGCTT 891
BSNT_00088___ 895 CTGGCAGAAGCAATTATTCGCGTTCATGAGCAGCAATCAGTCAGCTATCT 944
||||||||||||||||||||.||.||||||.|.|||||.|||||||..||
BL00519___prs 892 CTGGCAGAAGCAATTATTCGTGTGCATGAGAAACAATCTGTCAGCTTCCT 941
BSNT_00088___ 945 GTTCAGCTAA 954
||||...|||
BL00519___prs 942 GTTCGATTAA 951
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