Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00093 and BL00516

See DNA alignment / Visit BSNT_00093 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:45
# Commandline: needle
#    -asequence pep-align/BSNT_00093___yabK.1.5803.seq
#    -bsequence pep-align/BL00516___yabK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00093___yabK-BL00516___yabK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00093___yabK-BL00516___yabK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00093___yabK
# 2: BL00516___yabK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      59/76 (77.6%)
# Similarity:    69/76 (90.8%)
# Gaps:           0/76 ( 0.0%)
# Score: 347.0
# 
#
#=======================================

BSNT_00093___      1 MALHYYCRHCGVKVGSLESSMVSTDSLGFQHLTNEERNDMISYKENGDVH     50
                     |||||||||||||||||:.|.|:::.|||.||||:||||||||.:|||:|
BL00516___yab      1 MALHYYCRHCGVKVGSLDHSYVNSEQLGFNHLTNDERNDMISYMDNGDLH     50

BSNT_00093___     51 VLTICEDCQEALDRNPHYHEYHTFIQ     76
                     |.||||||||||:|||.||:||:|||
BL00516___yab     51 VKTICEDCQEALERNPDYHQYHSFIQ     76


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