Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00093 and BL00516
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:45
# Commandline: needle
# -asequence dna-align/BSNT_00093___yabK.1.5803.seq
# -bsequence dna-align/BL00516___yabK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00093___yabK-BL00516___yabK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00093___yabK-BL00516___yabK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00093___yabK
# 2: BL00516___yabK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity: 187/238 (78.6%)
# Similarity: 187/238 (78.6%)
# Gaps: 14/238 ( 5.9%)
# Score: 723.0
#
#
#=======================================
BSNT_00093___ 1 ATGGCTTTGCATTATTATTGTCGTCATTGCGGAGTGAAAGTAGGCAGTCT 50
||||||||.|||||||||||.||.||||||||.||.|||||.||.|||||
BL00516___yab 1 ATGGCTTTACATTATTATTGCCGGCATTGCGGCGTTAAAGTCGGAAGTCT 50
BSNT_00093___ 51 ---CGAATCTTCAATGGTATCGACAGACT---CACTT-GGATTTCAGCAC 93
|.|.|||| ||| |..|||| | ||.|| ||.|||.|.|||
BL00516___yab 51 TGACCATTCTT--ATG---TAAACAG--TGAACAGTTAGGCTTTAACCAC 93
BSNT_00093___ 94 TTAACAAATGAGGAAAGAAACGATATGATTTCTTATAAAGAAAATGGAGA 143
|||||||||||.|||||||||||||||||||||||||..||.|||||.||
BL00516___yab 94 TTAACAAATGATGAAAGAAACGATATGATTTCTTATATGGATAATGGGGA 143
BSNT_00093___ 144 TGTCCATGTTTTGACGATATGTGAAGACTGCCAAGAGGCGCTTGACCGAA 193
|.|.||.||...|||||||||||||||.||.|||||.||||||||.||||
BL00516___yab 144 TTTACACGTGAAGACGATATGTGAAGATTGTCAAGAAGCGCTTGAGCGAA 193
BSNT_00093___ 194 ATCCGCATTACCACGAATATCACACATTTATTCAATAA 231
|.|||.||||.|||.|||||||..|||||||||||||.
BL00516___yab 194 ACCCGGATTATCACCAATATCATTCATTTATTCAATAG 231
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