Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00096 and BL00513

See DNA alignment / Visit BSNT_00096 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence pep-align/BSNT_00096___yabM.1.5803.seq
#    -bsequence pep-align/BL00513___yabM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00096___yabM-BL00513___yabM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00096___yabM-BL00513___yabM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00096___yabM
# 2: BL00513___yabM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 548
# Identity:     302/548 (55.1%)
# Similarity:   383/548 (69.9%)
# Gaps:          34/548 ( 6.2%)
# Score: 1427.0
# 
#
#=======================================

BSNT_00096___      1 MDDSIGV---KRHWIWQGAFVLILAGVITKILSAVYRVPFQNIVGDVGFY     47
                         :|.   :|..:|||||||.|||:::|||||||||||||||||||||
BL00513___yab      1 ----MGFLKGQRQLLWQGAFVLSLAGILSKILSAVYRVPFQNIVGDVGFY     46

BSNT_00096___     48 IYQQVYPFLGIAVMLSTSGFPVIISKLMNDYSEKNHHTILKISALFLSLI     97
                     |:|||||.:||:|||:|||||||||||:|||...|...||::|.||||.:
BL00513___yab     47 IFQQVYPMIGISVMLATSGFPVIISKLLNDYGSANRAKILRVSMLFLSAV     96

BSNT_00096___     98 GILLFLCLYLGAVPIALFMGDSHLAVLIQVAACAFLLFPFVALLRGGFQG    147
                     |:..||.|:.||..||.||||..||.:|:..:.::||.|||:||||.|||
BL00513___yab     97 GLGFFLLLFAGAGAIAGFMGDPDLAGVIRAVSFSYLLLPFVSLLRGYFQG    146

BSNT_00096___    148 RHEMLPSALSQMTEQFLRVAVLLGLSFWLVKKGASLYTAGAAAASGSLAG    197
                     ...|||:||||:.||.|||..:|.|::||||.|.|||.|||.||.|||.|
BL00513___yab    147 SERMLPTALSQIGEQTLRVGAILVLTWWLVKSGFSLYDAGAGAAFGSLVG    196

BSNT_00096___    198 SLVALVILGVFWFKTKRENQTDRQNENVITTKELTKKLLLYSVTICVSSL    247
                     .|.|..||.|||.|.:::....|....   |.::.|:|.|||||||.:.|
BL00513___yab    197 GLAAFFILAVFWAKREKKATAARMEAG---TGDILKQLCLYSVTICTAGL    243

BSNT_00096___    248 LLLFIQLVDALNLYALLSG-GEASEEAKRLKGIYDRGQPLLQLGSVFAVS    296
                     :|:.|||||||:||:||:| |....:||..||:|||||||||||:|||.|
BL00513___yab    244 MLILIQLVDALHLYSLLAGQGMGELQAKHTKGVYDRGQPLLQLGTVFAAS    293

BSNT_00096___    297 IATSLVPYISMAVKNKELKIMKEKITSSLKLCLVLGTGASVGLICILKPV    346
                     |||:|||.::.|.|..|..:::|||..|||:..|:||||:.||||||:||
BL00513___yab    294 IATALVPSLTKAKKKGETAVLEEKIRYSLKMSFVIGTGAAAGLICILEPV    343

BSNT_00096___    347 NIMLFQNGEGTGALQVFSCSILFASMAVTAAAVLQGAGYTVFPAIAVGAG    396
                     |:|||:|.:||.|||:||.||||||:|:|..|||||.|.|..||::|..|
BL00513___yab    344 NVMLFKNSDGTAALQIFSASILFASLAMTMTAVLQGLGNTCLPAVSVCCG    393

BSNT_00096___    397 VAVKWVLNTLLVPRYGIEGASLATAASFAAVAGLNLYQLRQKEWLD----    442
                     ..||.|||.||:|.:||.||:.||..|||||||||.:||::|.|:.    
BL00513___yab    394 FLVKAVLNELLIPGFGISGAAFATMMSFAAVAGLNFFQLKRKGWIKLSEY    443

BSNT_00096___    443 KLRGVLIPIIGSALLMSAVLLAYTRLWTFLF----PATGRGAAVIESLSA    488
                     ::.|||:    ||::|||.|    .:|.|.|    |...|..:..|||||
BL00513___yab    444 RIAGVLL----SAVIMSAAL----AVWLFAFEAAIPHKSRWISAAESLSA    485

BSNT_00096___    489 VAIGGAVFIYCMMRLGIFTDEELNSVPFGSKLSKFMRRREQNGG----    532
                     |.:||.||:..:..|.:|:::||..|||||||....|.|   ||    
BL00513___yab    486 VFVGGVVFLSGIFTLRVFSEKELELVPFGSKLLTLKRER---GGRHGR    530


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00096 and BL00513

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
