Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00101 and BL00509
See
DNA alignment /
Visit
BSNT_00101 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence pep-align/BSNT_00101___yabQ.1.5803.seq
# -bsequence pep-align/BL00509___yabQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00101___yabQ-BL00509___yabQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00101___yabQ-BL00509___yabQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00101___yabQ
# 2: BL00509___yabQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 124/211 (58.8%)
# Similarity: 158/211 (74.9%)
# Gaps: 3/211 ( 1.4%)
# Score: 651.0
#
#
#=======================================
BSNT_00101___ 1 MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWI 50
|||||||||||||:|||.|||||||||..||:|:||||||||:||.|||:
BL00509___yab 1 MTLTTQFYTMLAMAGMGAWLGASLDTYTRFVVRSKTARWLLFLHDFLFWV 50
BSNT_00101___ 51 VQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSLCKRIYIKILKFVIY 100
|||||||||||.||||||||||||||:||.|.||||.|::|||:|:::|.
BL00509___yab 51 VQGLLFFYVLLSVNEGEFRIYIFLAVMLGFAAYQSLFKQVYIKLLEWMIS 100
BSNT_00101___ 101 LVVSVYQFFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLLLCL 150
..:.:.:...|:::.::|||:|||..||:.:..|..:..|.|..|..:||
BL00509___yab 101 FFIFISRLVSKMMRMMVFRPVVWTFQAILAIILFTMRNIYVLFRFFAVCL 150
BSNT_00101___ 151 YKIVMVLCFPIRFIAKQCLKLLPVKMRLTFRRYFEKGAGFLKKKKKLLIT 200
|||:....:||.||..||.:|||..:|...||:.:|||||.:|.|||.||
BL00509___yab 151 YKILKFAGYPIYFILYQCCRLLPAPVRGLLRRFLQKGAGFFEKGKKLFIT 200
BSNT_00101___ 201 IRTTITRFLKK 211
|: .:.|||
BL00509___yab 201 IK---AKLLKK 208
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.