Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00101 and BL00509
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence dna-align/BSNT_00101___yabQ.1.5803.seq
# -bsequence dna-align/BL00509___yabQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00101___yabQ-BL00509___yabQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00101___yabQ-BL00509___yabQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00101___yabQ
# 2: BL00509___yabQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 685
# Identity: 439/685 (64.1%)
# Similarity: 439/685 (64.1%)
# Gaps: 107/685 (15.6%)
# Score: 1310.0
#
#
#=======================================
BSNT_00101___ 1 ATGACGCTGACCACACAATTCTATACAATGCTGGCGATGTCCGGTATGGG 50
|||||||||||||||||.||||||||.||||||||.|||.||||.|||||
BL00509___yab 1 ATGACGCTGACCACACAGTTCTATACGATGCTGGCCATGGCCGGAATGGG 50
BSNT_00101___ 51 TCTCTGGCTTGGTGCTTCGCTTGATAC--ATACCGGCTCTTTGTCATTCG 98
....||||||||.|||||.|||||.|| ||||| |..||||||.||||
BL00509___yab 51 GGCATGGCTTGGCGCTTCCCTTGACACCTATACC--CGTTTTGTCGTTCG 98
BSNT_00101___ 99 TGCCAAAACAGCCAGATGGCTATTATTTATTCATGATATTCTTTTCTGGA 148
..|.||||||||.||.|||||.||.|||.|.|||||..||.|.||.|||.
BL00509___yab 99 CTCGAAAACAGCAAGGTGGCTGTTGTTTCTCCATGACTTTTTGTTTTGGG 148
BSNT_00101___ 149 TTGTGCAAGGGCTGCTTTTCTTTTATGTCTTGCTTCATGTAAATGAGGGA 198
|.||.|||||.||.|||||.||.|||||.|||||....||.|||||.||.
BL00509___yab 149 TAGTACAAGGCCTCCTTTTTTTCTATGTTTTGCTGAGCGTGAATGAAGGG 198
BSNT_00101___ 199 GAATTCAGGATTTACATCTTTTTAGCGGTTCTGCTGGGCGTTGCGACGTA 248
||||||.|.|||||.||||||.|.|||||..||||.||..||||..|.||
BL00509___yab 199 GAATTCCGAATTTATATCTTTCTGGCGGTCATGCTTGGTTTTGCCGCTTA 248
BSNT_00101___ 249 TCAGAGCCTTTGCAAACGAATCTATATAAAAATACTGAAATTCGTCATTT 298
|||||||||||..||.|...|||||||.||..|..||.|||...|.||||
BL00509___yab 249 TCAGAGCCTTTTTAAGCAGGTCTATATCAAGCTTTTGGAATGGATGATTT 298
BSNT_00101___ 299 ACCTTGTTGTTTCTGTTTATCAATTC---------TTCAAAAAACTCATT 339
.| ||.|||.|.||.||| || .|||||.| |.||.
BL00509___yab 299 CC----TTTTTTATATTCATC---TCCAGGCTGGTCTCAAAGA--TGATG 339
BSNT_00101___ 340 CAGCACG-TGTTATTTCGTCCTATTGTGTGGACATGCGGAGCGATCATCT 388
| |.|.| ||.|.|||||.|||.||||.|||||.|....|||.|| |.|
BL00509___yab 340 C-GGATGATGGTGTTTCGGCCTGTTGTATGGACGTTTCAAGCCAT--TTT 386
BSNT_00101___ 389 GGCTGGCGGCATT---TTTATTCAA-GA-AAACATACAGC------CTGA 427
.|| |..|||| |||| ||| || |||.|| | ||..
BL00509___yab 387 AGC---CATCATTCTCTTTA--CAATGAGAAATAT----CTATGTTCTTT 427
BSNT_00101___ 428 TAGGTTTTCTCCTGC--TGTGTCTATATAAAATAGT--------CATGGT 467
|..|||||.| ||| |.|||.|||||||.|||.| ||.|.|
BL00509___yab 428 TTCGTTTTTT--TGCGGTATGTTTATATAAGATATTAAAATTTGCAGGAT 475
BSNT_00101___ 468 TCTGTGTTTTCCGATCCGTTTTATCGCGA-AACAATGTTTGAAACTTCTT 516
.| |||||...|||||| .|.| |.|||||.|..|..||||||
BL00509___yab 476 AC--------CCGATTTATTTTAT-ACTATATCAATGCTGCAGGCTTCTT 516
BSNT_00101___ 517 CC---------TGTGAAAATGCGTCTAACTTTTAGACGTTATTTTG-AAA 556
|| |..|..|.|| ||.|||||.| ||||| |||
BL00509___yab 517 CCCGCCCCGGTTCGGGGATTG---------TTGAGACGCT-TTTTGCAAA 556
BSNT_00101___ 557 AAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGATAACCA-TAAG 605
||||.|||||||||.||.|||||..||||||||||||.|||||.| ||||
BL00509___yab 557 AAGGAGCAGGATTTTTCGAAAAGGGGAAGAAACTATTCATAACAATTAAG 606
BSNT_00101___ 606 ----AACGACCATTACACGGTTTTTGAAGAAATGA 636
||| ||||.||.||||||
BL00509___yab 607 GCAAAAC--------------TTTTAAAAAAATGA 627
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