Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00103 and BL00508

See DNA alignment / Visit BSNT_00103 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence pep-align/BSNT_00103___divIC.1.5803.seq
#    -bsequence pep-align/BL00508___divIC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00103___divIC-BL00508___divIC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00103___divIC-BL00508___divIC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00103___divIC
# 2: BL00508___divIC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:      79/125 (63.2%)
# Similarity:   102/125 (81.6%)
# Gaps:           0/125 ( 0.0%)
# Score: 405.0
# 
#
#=======================================

BSNT_00103___      1 MNFSRERTITEIQNDYKEQVERQNQLKKRRRKGLYRRLTVFGALVFLTAI     50
                     ||....|.|::|||:||||:||:.|..||:|:||||||.||||:|.|:||
BL00508___div      1 MNDPTRRNISQIQNEYKEQMERKQQQLKRKRRGLYRRLMVFGAVVLLSAI     50

BSNT_00103___     51 VLASSVWSQTSSLSAKEEKKEQLEKELKSLKTKQTDLKEEISKLKDEDYV    100
                     |:.||:|||||.:|||:|||.:|.|:|:.|:.|::|||:||.||||||||
BL00508___div     51 VIVSSLWSQTSDISAKQEKKAELLKQLEQLEAKKSDLKDEIVKLKDEDYV    100

BSNT_00103___    101 TELARRDLFMSGDGEIIFNVEKKSK    125
                     .||||:|.::|.||||||..|.|||
BL00508___div    101 AELARKDYYLSKDGEIIFKFEDKSK    125


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