Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00116 and BL00505

See DNA alignment / Visit BSNT_00116 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence pep-align/BSNT_00116___yabS.1.5803.seq
#    -bsequence pep-align/BL00505___yabS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00116___yabS-BL00505___yabS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00116___yabS-BL00505___yabS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00116___yabS
# 2: BL00505___yabS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     207/245 (84.5%)
# Similarity:   222/245 (90.6%)
# Gaps:           0/245 ( 0.0%)
# Score: 1041.0
# 
#
#=======================================

BSNT_00116___      1 MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIMEENQIDP     50
                     |..||||||||:||||||.||||.|||||||||||||||||||:|:::|.
BL00505___yab      1 MKKGHLNQILLLTDGCSNRGEDPQAMAAFAKEQGITVNVIGIMDEHEMDQ     50

BSNT_00116___     51 EAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELK    100
                     |||||||||||||||||||||.||||||||||||||||||||||||.|||
BL00505___yab     51 EAMKEVEGIALAGGGVHQVVYTSQLSQTVQMVTKKAMTQTLQGVVNSELK    100

BSNT_00116___    101 QILGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAPKLP    150
                     |||||:.||:||.|:||||||||||||||||||.|||||||||||.||||
BL00505___yab    101 QILGKHTEMDELPPDKRGEVMEVVDELGETVHLHVLVLVDTSASMNPKLP    150

BSNT_00116___    151 TVKEALIDLSVSLNSRIGNNEFAMCIFPGKKQEVELVLNWTPKLQSLSTL    200
                     ||||||||||:|||||||.|||||.|||||||||||||:||||.:|||::
BL00505___yab    151 TVKEALIDLSISLNSRIGENEFAMLIFPGKKQEVELVLDWTPKFESLSSI    200

BSNT_00116___    201 FAKLSTGGITPTGPAIREATLQFEKIRSRRGMLADDERRFDEFGM    245
                     |:|||.|||||||||||||...|.||.|||.||.|||:||||||.
BL00505___yab    201 FSKLSAGGITPTGPAIREAIQHFNKIGSRRRMLEDDEKRFDEFGG    245


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