Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00116 and BL00505
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:47
# Commandline: needle
# -asequence dna-align/BSNT_00116___yabS.1.5803.seq
# -bsequence dna-align/BL00505___yabS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00116___yabS-BL00505___yabS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00116___yabS-BL00505___yabS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00116___yabS
# 2: BL00505___yabS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 740
# Identity: 583/740 (78.8%)
# Similarity: 583/740 (78.8%)
# Gaps: 4/740 ( 0.5%)
# Score: 2263.0
#
#
#=======================================
BSNT_00116___ 1 GTGAACAACGGACATTTAAATCAAATTTTGCTGATAACGGATGGCTGCTC 50
.||||.||.||.|||||.||||||||..||||..|.|||||.|||||.||
BL00505___yab 1 ATGAAAAAGGGGCATTTGAATCAAATCCTGCTTTTGACGGACGGCTGTTC 50
BSNT_00116___ 51 AAACCATGGGGAAGACCCGCTTGCAATGGCTGCTTTTGCTAAAGAGCAGG 100
|||||..||.||||||||||..||.||||||||.|||||.||||||||||
BL00505___yab 51 AAACCGCGGCGAAGACCCGCAGGCCATGGCTGCCTTTGCGAAAGAGCAGG 100
BSNT_00116___ 101 GGATTACGGTAAATGTTATTGGTATAATGGAAGAAAATCAAATTGACCCT 150
|.|||||.||.|||||.|||||.||.|||||.||..||.||||.||.|..
BL00505___yab 101 GAATTACCGTGAATGTGATTGGGATTATGGACGAGCATGAAATGGATCAG 150
BSNT_00116___ 151 GAGGCAATGAAGGAAGTCGAAGGGATTGCACTTGCCGGAGGAGGCGTGCA 200
|||||.|||||.||||||||||||||.||.||.||.||.|||||.||.||
BL00505___yab 151 GAGGCGATGAAAGAAGTCGAAGGGATCGCTCTCGCAGGCGGAGGAGTTCA 200
BSNT_00116___ 201 CCAAGTCGTTTATGCATCTCAGCTTTCACAAACTGTTCAAATGGTAACAA 250
|||.||.|||||..|.||.|||||.||.||.||.|||||||||||.||||
BL00505___yab 201 CCAGGTGGTTTACACGTCGCAGCTGTCGCAGACCGTTCAAATGGTGACAA 250
BSNT_00116___ 251 AAAAAGCGATGACGCAAACCTTACAAGGTGTAGTCAATCA-AGAACTGAA 299
||||.|||||||||||||||.|.|||||.||.||||| || .||.||.||
BL00505___yab 251 AAAAGGCGATGACGCAAACCCTTCAAGGCGTGGTCAA-CAGTGAGCTCAA 299
BSNT_00116___ 300 ACAGATTCTCGGAAAGAATGTGGAAATGGAAGAGCTTTCCCCGGAAAAAC 349
|||.||||||||.|||.||...||||||||.||.||..|.||.||.||||
BL00505___yab 300 ACAAATTCTCGGCAAGCATACCGAAATGGATGAACTGCCTCCTGATAAAC 349
BSNT_00116___ 350 GCGGCGAAGTCATGGAAGTGGTAGACGAGCTTGGAGAAACGGTGCATCTT 399
||||.||||||||||||||.||.|||||||||||.||.||.|||||||||
BL00505___yab 350 GCGGTGAAGTCATGGAAGTCGTTGACGAGCTTGGTGAGACCGTGCATCTT 399
BSNT_00116___ 400 CAGGTTTTGGTTCTTGTTGATACAAGTGCAAGTATGGCGCCAAAGCTTCC 449
||.||..||||||||||.||||||||.|||||.|||...||.||||||||
BL00505___yab 400 CATGTACTGGTTCTTGTCGATACAAGCGCAAGCATGAATCCGAAGCTTCC 449
BSNT_00116___ 450 AACAGTAAAAGAGGCACTGATTGATTTGTCTGTAAGCCTCAATTCTCGAA 499
.||.||.|||||.||..||||.|||.|.||..|.||.||||||||..|||
BL00505___yab 450 GACCGTTAAAGAAGCGTTGATAGATCTTTCCATCAGTCTCAATTCAAGAA 499
BSNT_00116___ 500 TCGG-GAATAACGAATTTGCGATGTGTATATTTCCCGGGAAAAAACAAGA 548
|||| ||| |||||||||||||||..||||||||||||||||||||||||
BL00505___yab 500 TCGGCGAA-AACGAATTTGCGATGCTTATATTTCCCGGGAAAAAACAAGA 548
BSNT_00116___ 549 GGTCGAGCTTGTGCTGAACTGGACACCGAAGCTGCAATCTCTTTCCACAC 598
||||||.||||||||..|.|||||.||||||.|..||||||||||..||.
BL00505___yab 549 GGTCGAACTTGTGCTCGATTGGACCCCGAAGTTTGAATCTCTTTCTTCAA 598
BSNT_00116___ 599 TCTTTGCAAAGCTTTCGACAGGCGGCATCACGCCGACAGGTCCGGCAATT 648
|.|||.|.||||||||..|.||.|||||.||.||||||||.||.|||||.
BL00505___yab 599 TATTTTCCAAGCTTTCAGCCGGTGGCATTACACCGACAGGACCCGCAATA 648
BSNT_00116___ 649 CGTGAAGCGACACTGCAGTTTGAAAAAATACGCTCAAGAAGGGGCATGCT 698
||.||.||||..|.|||.|||.|.|||||..|||||||||||.|.|||.|
BL00505___yab 649 CGAGAGGCGATTCAGCATTTTAACAAAATCGGCTCAAGAAGGAGAATGTT 698
BSNT_00116___ 699 GGCAGATGATGAACGACGCTTTGACGAGTTTGGCATGTAG 738
.|.|||.||||||..||||||.||||||||||||...|||
BL00505___yab 699 AGAAGACGATGAAAAACGCTTCGACGAGTTTGGCGGCTAG 738
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