Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00118 and BL00504
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:47
# Commandline: needle
# -asequence pep-align/BSNT_00118.1.5803.seq
# -bsequence pep-align/BL00504___yabT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00118-BL00504___yabT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00118-BL00504___yabT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00118
# 2: BL00504___yabT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 193/345 (55.9%)
# Similarity: 246/345 (71.3%)
# Gaps: 49/345 (14.2%)
# Score: 1013.0
#
#
#=======================================
BSNT_00118 1 ----------------------------------------MYLAEASDGH 10
:|||::..|.
BL00504___yab 1 MKNASTSLAASLKPGAAVVGKWNNHSYKIIRQLGKGANGVVYLADSRKGR 50
BSNT_00118 11 VALKVSDDSLSITSEVNVLKSFSKAQSVTMGPSFFDTDDTYIPGTNTKVS 60
||||||||||||||||||||||||||:..|||||||.||..:.||..|:|
BL00504___yab 51 VALKVSDDSLSITSEVNVLKSFSKAQAKAMGPSFFDVDDMMVTGTGKKLS 100
BSNT_00118 61 FYAMEYIKGPLLLKYVSDKGGEWIPVLMIQLLSSLSVLHQQGWIFGDLKP 110
||.||||:|||||:||::||.||.|||:.|||||||.:|::||:||||||
BL00504___yab 101 FYVMEYIEGPLLLRYVNEKGEEWTPVLISQLLSSLSAIHREGWVFGDLKP 150
BSNT_00118 111 DNLIVTGPPARIRCIDVGGTTKEGRAIKEYTEFYDRGYWGYGTRKAEPSY 160
:||||||||.:||||||||||||||||||||||:|||||.:|||||||||
BL00504___yab 151 ENLIVTGPPPQIRCIDVGGTTKEGRAIKEYTEFFDRGYWEFGTRKAEPSY 200
BSNT_00118 161 DLFAVAMIMINSVHKKEFKKTNQPKEQLRSLIEGNPLLQKYKKALFSALN 210
|||:|||||:|...|||||||.:|:|||.|:|:|:|.|::||..|.|||.
BL00504___yab 201 DLFSVAMIMVNCAVKKEFKKTARPQEQLMSVIDGHPFLKRYKPVLASALK 250
BSNT_00118 211 GDYQSADEMKKDMLDAGQ----KAAQRKQHIKAS----PQPATRQRQQIP 252
|.|::|||||.|:|:.|: :::::.:..::| |....|.::..|
BL00504___yab 251 GSYRTADEMKGDLLEIGRPPRMQSSRQSRTARSSSASAPSQGLRHKRGTP 300
BSNT_00118 253 RQRKITKTRYTPKQKPAKSGGLFETTLIVISVLALYFAYIIFFLI 297
:|:::...| ..::.|:||||:|||.|||:||||||||||:.|.|
BL00504___yab 301 QQQRLRSGR-RKQRNPSKSGGVFETLLIVVSVLALYFAYIVLFFI 344
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