Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00118 and BL00504
See
Amino acid alignment /
Visit
BSNT_00118 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:47
# Commandline: needle
# -asequence dna-align/BSNT_00118.1.5803.seq
# -bsequence dna-align/BL00504___yabT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00118-BL00504___yabT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00118-BL00504___yabT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00118
# 2: BL00504___yabT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1089
# Identity: 646/1089 (59.3%)
# Similarity: 646/1089 (59.3%)
# Gaps: 249/1089 (22.9%)
# Score: 2059.5
#
#
#=======================================
BSNT_00118 0 -------------------------------------------------- 0
BL00504___yab 1 ATGAAAAACGCTTCGACGAGTTTGGCGGCTAGTCTAAAGCCGGGTGCAGC 50
BSNT_00118 0 -------------------------------------------------- 0
BL00504___yab 51 CGTTGTTGGAAAGTGGAACAATCATTCCTACAAGATCATCAGACAGCTTG 100
BSNT_00118 1 --------------------GTGTATTTGGCAGAAGCATCAGATGGACAT 30
||.|||.||||.||..||..|.|.||.|..
BL00504___yab 101 GAAAAGGGGCAAATGGGGTTGTTTATCTGGCCGATTCAAGAAAGGGCCGG 150
BSNT_00118 31 GTTGCCTTAAAGGTGAGTGATGACAGCCTGTCTATTACTTCTGAAGTGAA 80
|||||.|||||.|||||.||||||||||||||.|||||.||.||||||||
BL00504___yab 151 GTTGCATTAAAAGTGAGCGATGACAGCCTGTCCATTACCTCGGAAGTGAA 200
BSNT_00118 81 TGTCTTGAAATCTTTCTCAAAGGCCCAGTCCGTTA----CGATGGGGCCT 126
|||..|||||||||||||||||||||||.| | |.|||||||||
BL00504___yab 201 TGTTCTGAAATCTTTCTCAAAGGCCCAGGC----AAAAGCAATGGGGCCT 246
BSNT_00118 127 TCTTTTTTTGATACGGATGATACTTAT-ATTCCCGGTACC----AATACG 171
||||||||||||..||||||.| |.|| .||.|.||.||| ||
BL00504___yab 247 TCTTTTTTTGATGTGGATGACA-TGATGGTTACAGGCACCGGCAAA---- 291
BSNT_00118 172 AAAGTTTCATTTTATGCAATGGAATACATAAAAGGGCCGCTGCTTTTGAA 221
|||.||||||||||||..||||||||.||..||||.|||||.||||| ||
BL00504___yab 292 AAACTTTCATTTTATGTCATGGAATATATTGAAGGTCCGCTTCTTTT-AA 340
BSNT_00118 222 G-TATGTCAGTGATAAAGGAGGAGAGTGGATACCTGTATTAATGATTCAG 270
| |||||.|..||.|||||.|..||.||||..||.||..|.||.|..|||
BL00504___yab 341 GATATGTAAACGAAAAAGGCGAGGAATGGACTCCGGTGCTGATCAGCCAG 390
BSNT_00118 271 CTGTTATCCAGCTTATCGGTGCTTCACCAGC-AAGGATGGATATTCGGCG 319
||..|.||.|||.|.||||.|.||||.| || ||||||||.|.||.||.|
BL00504___yab 391 CTTCTCTCAAGCCTGTCGGCGATTCATC-GCGAAGGATGGGTGTTTGGAG 439
BSNT_00118 320 ATCTTAAA-CCTGACAATCTGATCGTAACTGGTCCGC--CCGCAAGGATC 366
|| ||||| ||.||.|||.|.|||||.||.|||||.| |||||| |||
BL00504___yab 440 AT-TTAAAGCCCGAGAATTTAATCGTGACGGGTCCTCCGCCGCAA--ATC 486
BSNT_00118 367 CGCTGCATTGATGTGGGCGGCACGACAAAGGAAGGCCGGGCGATAAAAGA 416
||||||||||||||||||||.||||||||.||.||||||||.||.||.||
BL00504___yab 487 CGCTGCATTGATGTGGGCGGGACGACAAAAGAGGGCCGGGCAATTAAGGA 536
BSNT_00118 417 GTATACGGAGTTTTATGACAGAGGCTATTGGGGGTATGGAACAAGAAAGG 466
.|||||||||||||.|||||||||||||||||..|..||.||..|.||||
BL00504___yab 537 ATATACGGAGTTTTTTGACAGAGGCTATTGGGAATTCGGCACTCGTAAGG 586
BSNT_00118 467 CAGAGCCATCCTATGATCTGTTCGCAGTTGCCATGATTATGATCAACAGT 516
|.|||||.||.|||||.|||||..||||.||||||||||||.|.|||.||
BL00504___yab 587 CTGAGCCGTCGTATGACCTGTTTTCAGTCGCCATGATTATGGTGAACTGT 636
BSNT_00118 517 GTGCATAAAAAAGAATTTAAGAAAACGAACCA--GCCCAAAGAACAGCTT 564
|.|...|||||||||||.|||||.|| |.|| |||..|.||.|||||.
BL00504___yab 637 GCGGTGAAAAAAGAATTCAAGAAGAC--AGCAAGGCCTCAGGAGCAGCTC 684
BSNT_00118 565 AGGTCTCTCATCGAAGGAAACCCGCTGCTTCAAAA--GTATAAAAAAGCG 612
|.|||..||||.||.|||.|.|||.| ||.|||| |||||||...|..
BL00504___yab 685 ATGTCAGTCATTGACGGACATCCGTT--TTTAAAACGGTATAAACCGGTT 732
BSNT_00118 613 CTTTTTTCAGCCTTGAACGGAGATTATCAATCCGCAGATGAAATGAAAAA 662
|||..|||.||.||.||.|||...||||.|.|.||.|||||||||||...
BL00504___yab 733 CTTGCTTCTGCTTTAAAAGGAAGCTATCGAACAGCTGATGAAATGAAGGG 782
BSNT_00118 663 GGATATGCTAGA----CGCGGGGC------AA---AAAGCAGCACAAA-- 697
.|||.|.||.|| .||.||.| || ||||||||....|
BL00504___yab 783 AGATCTTCTGGAAATCGGCCGGCCGCCACGAATGCAAAGCAGCCGCCAGT 832
BSNT_00118 698 -GAAAACA---------------GCATATAAAAGCATCACCGCA--GCCT 729
||.|||| ||||.| ||..|..|||| ||||
BL00504___yab 833 CGAGAACAGCCCGTTCCTCATCGGCATCT----GCCCCGTCGCAAGGCCT 878
BSNT_00118 730 GCCAC-----------ACGACAAAGACAGCAAA---TACCGCGC---CAA 762
||..| |||.|..|| ||||||| ||..|.|| |..
BL00504___yab 879 GCGGCATAAGCGGGGGACGCCTCAG-CAGCAAAGGTTAAGGAGCGGGCGC 927
BSNT_00118 763 AGAAAAATAACGAAGACGCGATATACCCCAAAACAGAAA-CCGGCTAAGT 811
||||| || |.||||| ||..||||.|
BL00504___yab 928 AGAAA------------GC-------------AAAGAAACCCTTCTAAAT 952
BSNT_00118 812 -CGGGGGGGTTATTTGAAACAACGCTGATCGTGATCAGTGTTTTAGCGCT 860
|||.||.||| ||||||||...|.|||||||..|.||.|||.|.||.||
BL00504___yab 953 CCGGCGGTGTT-TTTGAAACGCTGTTGATCGTCGTAAGCGTTCTTGCCCT 1001
BSNT_00118 861 TTATTTCGCCTATAT-----TATTTTTTTCTTAATCTGA 894
|||.||.||.||||| |.||||||..|||.
BL00504___yab 1002 TTACTTTGCGTATATCGTTCTCTTTTTTATTTAG----- 1035
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.