Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00071 and BL00502

See DNA alignment / Visit BSNT_00071 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence pep-align/BSNT_00071___abrB.1.5803.seq
#    -bsequence pep-align/BL00502___abrB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00071___abrB-BL00502___abrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00071___abrB-BL00502___abrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00071___abrB
# 2: BL00502___abrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 94
# Identity:      89/94 (94.7%)
# Similarity:    91/94 (96.8%)
# Gaps:           0/94 ( 0.0%)
# Score: 434.0
# 
#
#=======================================

BSNT_00071___      1 MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKP     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL00502___abr      1 MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKP     50

BSNT_00071___     51 NMTCQVTGEVSDDNLKLAGGKLVLSKEGAEQIISEIQNQLQNLK     94
                     |||||||||||||||||||||||||.|||||||:|||.|||:.|
BL00502___abr     51 NMTCQVTGEVSDDNLKLAGGKLVLSPEGAEQIINEIQAQLQSQK     94


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.