Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00071 and BL00502

See Amino acid alignment / Visit BSNT_00071 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence dna-align/BSNT_00071___abrB.1.5803.seq
#    -bsequence dna-align/BL00502___abrB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00071___abrB-BL00502___abrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00071___abrB-BL00502___abrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00071___abrB
# 2: BL00502___abrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     252/289 (87.2%)
# Similarity:   252/289 (87.2%)
# Gaps:           8/289 ( 2.8%)
# Score: 1121.0
# 
#
#=======================================

BSNT_00071___      1 ATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGT     50
                     |||||||||||.||||||||||||||||||||||||.|||||||.||.||
BL00502___abr      1 ATGAAATCTACAGGTATTGTACGTAAAGTTGATGAACTAGGACGCGTGGT     50

BSNT_00071___     51 TATTCCTATCGAACTGCGTCGTACTCTTGGAATCGCAGAAAAAGATGCTC    100
                     .|||||.||||||||.||.|||||.||||||||||||||||||||.||||
BL00502___abr     51 GATTCCAATCGAACTTCGCCGTACGCTTGGAATCGCAGAAAAAGACGCTC    100

BSNT_00071___    101 TTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCA    150
                     |||||||||||||.|||||.||||||||||||.|.|||||||||||||||
BL00502___abr    101 TTGAAATCTATGTAGATGACGAAAAAATCATCTTGAAAAAATATAAACCA    150

BSNT_00071___    151 AACATGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACT    200
                     |||||||||||||||||.||.|||||.|||||||||||.|||||||||||
BL00502___abr    151 AACATGACTTGCCAAGTTACAGGTGAGGTTTCTGATGACAACCTTAAACT    200

BSNT_00071___    201 TGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGCGCTGAGCAAATCATCA    250
                     ||||||||||||||||||||||||....||||||||||||||||||||.|
BL00502___abr    201 TGCAGGCGGTAAATTGGTTCTTAGCCCTGAAGGCGCTGAGCAAATCATTA    250

BSNT_00071___    251 GCGAAATCCAAAACCAGCTTCAA----AACCTTAAATAA    285
                     .||||||.|||...||.||||||    ||    ||||||
BL00502___abr    251 ACGAAATTCAAGCACAACTTCAATCTCAA----AAATAA    285


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