Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_05273 and BL00497

See DNA alignment / Visit BSNT_05273 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence pep-align/BSNT_05273___yvdF.1.5803.seq
#    -bsequence pep-align/BL00497___yvdF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05273___yvdF-BL00497___yvdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05273___yvdF-BL00497___yvdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05273___yvdF
# 2: BL00497___yvdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 589
# Identity:     447/589 (75.9%)
# Similarity:   508/589 (86.2%)
# Gaps:           5/589 ( 0.8%)
# Score: 2498.0
# 
#
#=======================================

BSNT_05273___      1 MEYAAIHHQPFSTDAYSYDGRTVHIKIRTKKGDADHIRFIWGDPYEYNDG     50
                     ||||||||||||:|||||:|||:||||||||.||:|:|.:|||||||..|
BL00497___yvd      1 MEYAAIHHQPFSSDAYSYNGRTLHIKIRTKKDDAEHVRLVWGDPYEYTGG     50

BSNT_05273___     51 KWSANEQPMRKIAATEMHDYWFAEVVPPFRRLQYAFVVTD-DHEDIFFGS     99
                     .|.|||..|.|||||..||||||||.||||||||.|::|. |..|.|:||
BL00497___yvd     51 TWKANELAMAKIAATSTHDYWFAEVAPPFRRLQYGFILTGADDRDTFYGS    100

BSNT_05273___    100 SGVCPYNEKTLETIHYYFKFPFVHEADTFQAPEWVKSTVWYQIFPERFAN    149
                     :|.||:..|..:...:.||||||||||||.||:||||||||||||||||:
BL00497___yvd    101 NGACPFAGKAADIGKHCFKFPFVHEADTFDAPDWVKSTVWYQIFPERFAS    150

BSNT_05273___    150 GREDLSPKNALPWGSKDPGVNDFFGGDLQGIVDKLDYLEDLGVNGIYLTP    199
                     |||||||:||||||||||..:||||||||||:|||||||||||.||||||
BL00497___yvd    151 GREDLSPENALPWGSKDPEAHDFFGGDLQGIMDKLDYLEDLGVGGIYLTP    200

BSNT_05273___    200 IFSAPSNHKYDTLDYFSIDPHFGDPEIFRTFVSQLHQRGMRIMLDAVFNH    249
                     ||:||||||||||||.||||||||.|:|||.||::|:|||:|||||||||
BL00497___yvd    201 IFAAPSNHKYDTLDYCSIDPHFGDEELFRTLVSRIHERGMKIMLDAVFNH    250

BSNT_05273___    250 IGSASPQWQDVVKNGDLSRYKDWFHIHSFPVTDDNYDRFAFTADMPKLNT    299
                     |||||.:||||||||:.||||||||||||||.:.:||.||||.:||||||
BL00497___yvd    251 IGSASQEWQDVVKNGETSRYKDWFHIHSFPVKEGSYDTFAFTPEMPKLNT    300

BSNT_05273___    300 ANPEVQKYLLDIALYWIREFDIDGWRLDVANEVDHVFWKTFRQAVSAENP    349
                     ||||||.||||||||||||||||||||||||||||.|||.|||||:||.|
BL00497___yvd    301 ANPEVQAYLLDIALYWIREFDIDGWRLDVANEVDHAFWKKFRQAVTAEKP    350

BSNT_05273___    350 DVYILGEIWHSAEPWLRGDEFHAAMNYPFTEPMIEYFADRTIPASRMAHR    399
                     |::|||||||.|:|||||||||:.||||||||||:||||.:|.||:||.|
BL00497___yvd    351 DIFILGEIWHQADPWLRGDEFHSVMNYPFTEPMIDYFADGSISASQMASR    400

BSNT_05273___    400 VNAHLMNGMKQANEVMFNLLDSH-TKRLLTRCRNDEKKARALLAFMFAQT    448
                     :|:|||:||||.||||||||||| |||:||||..|:||.|:|||||||||
BL00497___yvd    401 INSHLMSGMKQVNEVMFNLLDSHDTKRILTRCGGDDKKVRSLLAFMFAQT    450

BSNT_05273___    449 GSPCIYYGTEIGLDGENDPLCRKCMVWEKEKQNQDMLRFMKRLIALRKQE    498
                     ||||||||||:||||.:|||||||||||:|||||:||.||||||||||||
BL00497___yvd    451 GSPCIYYGTEVGLDGGDDPLCRKCMVWEEEKQNQEMLAFMKRLIALRKQE    500

BSNT_05273___    499 NTLLTEGHLEWNLLDDKNDFISFSRTLDEKILIYFFNQGNAVQHVSLREL    548
                     |.:||.|.|||.|:||:|||:|||||.:.|.|||||:||:.|:.|.||:|
BL00497___yvd    501 NDVLTYGALEWKLVDDQNDFVSFSRTHEGKELIYFFHQGSEVRRVRLRDL    550

BSNT_05273___    549 NIDRNKKICDAWTEQPLHHHDVIAVQPGEFLILSAAAPV    587
                     .|..:|:|.|||||:.|.|.||:.:|||.|.||.|.   
BL00497___yvd    551 KIASDKRIYDAWTEEALQHDDVVDIQPGGFFILGAV---    586


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05273 and BL00497

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
