Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05273 and BL00497
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:22
# Commandline: needle
# -asequence dna-align/BSNT_05273___yvdF.1.5803.seq
# -bsequence dna-align/BL00497___yvdF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05273___yvdF-BL00497___yvdF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05273___yvdF-BL00497___yvdF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05273___yvdF
# 2: BL00497___yvdF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1798
# Identity: 1349/1798 (75.0%)
# Similarity: 1349/1798 (75.0%)
# Gaps: 71/1798 ( 3.9%)
# Score: 4988.5
#
#
#=======================================
BSNT_05273___ 1 ATGGAATATGCAGCGATTCACCACCAGCCATTCAGCACAGATGCTTATTC 50
|||||||||||||||||.||.||.|||||.||||||.|.|||||.|||||
BL00497___yvd 1 ATGGAATATGCAGCGATACATCATCAGCCTTTCAGCTCTGATGCCTATTC 50
BSNT_05273___ 51 TTATGATGGGCGGACTGTGCATATCAAGATTCGGACGAAAAAAGG-TGAT 99
|||..||||.|||||..||||.||||||||.||.|| |||||||| ||||
BL00497___yvd 51 TTACAATGGACGGACATTGCACATCAAGATCCGTAC-AAAAAAGGATGAT 99
BSNT_05273___ 100 GCAGATCACATTCGATTCATTTGGGGTGATCCCTATGAGTACAACGACGG 149
||.||.|||.|.||.||..|||||||.|||||.||.||.||||.||.|||
BL00497___yvd 100 GCCGAACACGTCCGCTTGGTTTGGGGCGATCCTTACGAATACACCGGCGG 149
BSNT_05273___ 150 CAAATGGTCCGCAAACGAGCAGCCGATGAGAAAAATTGCTGCAACAGAAA 199
||.||||...||.|||||||...|||||...||||||||.||||||...|
BL00497___yvd 150 CACATGGAAAGCGAACGAGCTTGCGATGGCGAAAATTGCCGCAACAAGCA 199
BSNT_05273___ 200 TGCATGACTATTGGTTTGCTGAAGTGGTGCCGCCATTTAGACGTTTACAA 249
..|||||.||.||||||||.|||||||.|||.|||||.||.|||.|.|||
BL00497___yvd 200 CCCATGATTACTGGTTTGCCGAAGTGGCGCCTCCATTCAGGCGTCTGCAA 249
BSNT_05273___ 250 TATGCGTTTGTTGTAACAGACGATCATGA---AGATATCTTTTT-CGGAA 295
||.|..|||.|..|.||||.||.|.|||| |||.| |||||| |||||
BL00497___yvd 250 TACGGATTTATCCTGACAGGCGCTGATGATCGAGACA-CTTTTTACGGAA 298
BSNT_05273___ 296 GTTCGGGTGTATGCCCTTATAAC--GAAA---------------AAACAC 328
|....||||.|||.||.|.|..| |||| ||||||
BL00497___yvd 299 GCAATGGTGCATGTCCGTTTGCCGGGAAAGCGGCGGATATAGGCAAACAC 348
BSNT_05273___ 329 TGGAAACGATTCATTATTACTTTAAATTTCCGTTTGTTCACGAGGCTGAT 378
|| .||||||||||||||||||||.|||||.||.
BL00497___yvd 349 TG-----------------TTTTAAATTTCCGTTTGTTCATGAGGCAGAC 381
BSNT_05273___ 379 ACATTTCAAGCGCCTGAATGGGTCAAGTCAACGGTTTGGTATCAAATTTT 428
||.|||.|.||.|||||.||||||||.|||||.||.||||||||||||||
BL00497___yvd 382 ACGTTTGATGCACCTGACTGGGTCAAATCAACCGTCTGGTATCAAATTTT 431
BSNT_05273___ 429 TCCGGAGCGTTTTGCAAATGGAAGAGAAGACTTGTCACCGAAGAATGCAT 478
|||||||||.|||||.|..||..|.|||||.|||||.|||.|.||.||.|
BL00497___yvd 432 TCCGGAGCGCTTTGCCAGCGGGCGGGAAGATTTGTCTCCGGAAAACGCTT 481
BSNT_05273___ 479 TGCCGTGGGGGAGCAAGGACCC--GGGCGTCAATGATTTTTTTGGAGGAG 526
||||.|||||.|||||.||.|| .|||| .|.||||||||.|||||.|
BL00497___yvd 482 TGCCATGGGGAAGCAAAGATCCTGAGGCG--CACGATTTTTTCGGAGGGG 529
BSNT_05273___ 527 ATTTGCAAGGGATTGTTGACAAGCTTGATTATTTAGAGGATTTAGGGGTG 576
|||||||.|||||..|.||||||||.||.|||||.||.||.||.|||||.
BL00497___yvd 530 ATTTGCAGGGGATCATGGACAAGCTGGACTATTTGGAAGACTTGGGGGTA 579
BSNT_05273___ 577 AACGGCATTTATCTGACGCCGATCTTTTCCGCGCCTTCTAATCATAAATA 626
..|||.||.|||.||||||||||||||.||||||||||.||.||||||||
BL00497___yvd 580 GGCGGAATCTATTTGACGCCGATCTTTGCCGCGCCTTCCAACCATAAATA 629
BSNT_05273___ 627 CGACACGCTGGATTACTTTTCTATTGATCCGCATTTCGGGGATCCAGAGA 676
||||||..||||.||.|..||.||.|||||||||||.||.|||...|||.
BL00497___yvd 630 CGACACATTGGACTATTGCTCCATCGATCCGCATTTTGGCGATGAGGAGC 679
BSNT_05273___ 677 TTTTTCGTACATTTGTCAGCCAGCTGCATCAGCGGGGGATGAGAATTATG 726
|.|||||.||..|.|||||||.|.|.||..|||||||.||||.|||.|||
BL00497___yvd 680 TCTTTCGCACGCTGGTCAGCCGGATTCACGAGCGGGGAATGAAAATCATG 729
BSNT_05273___ 727 CTTGATGCGGTTTTTAACCATATAGGAAGCGCGTCTCCGCAA---TGGCA 773
||||||||.|||||||||||.||.||.|||| ||.||||| |||||
BL00497___yvd 730 CTTGATGCTGTTTTTAACCACATTGGCAGCG---CTTCGCAAGAGTGGCA 776
BSNT_05273___ 774 GGATGTCGTCAAAAACGGAGATCTATCCCGCTATAAGGACTGGTTCCATA 823
||||||.|||||||||||.||....|||||||||||.|||||||||||||
BL00497___yvd 777 GGATGTTGTCAAAAACGGTGAAACGTCCCGCTATAAAGACTGGTTCCATA 826
BSNT_05273___ 824 TTCACTCTTTTCCCGTCACAGACGACAATTATGACAGATTTGCTTTTACA 873
||||.|||||.||.||.|.|||.|.||..|||||.|.||||||.|||||.
BL00497___yvd 827 TTCATTCTTTCCCTGTTAAAGAAGGCAGCTATGATACATTTGCGTTTACT 876
BSNT_05273___ 874 GCTGATATGCCGAAGCTAAACACGGCTAATCCCGAAGTGCAGAAATATTT 923
.|.||.|||||||||||.||.|||||.||.||.|||||.|||...|||||
BL00497___yvd 877 CCCGAGATGCCGAAGCTCAATACGGCCAACCCGGAAGTTCAGGCTTATTT 926
BSNT_05273___ 924 GCTTGATATTGCTTTGTACTGGATTCGCGAATTTGACATTGACGGCTGGC 973
||||||||||||..||||||||||.|||||||||||.||.||||||||||
BL00497___yvd 927 GCTTGATATTGCGCTGTACTGGATCCGCGAATTTGATATCGACGGCTGGC 976
BSNT_05273___ 974 GTTTGGATGTCGCAAATGAAGTGGATCACGTGTTTTGGAAGACATTTAGG 1023
||||||||||.|||||||||||.|||||.|.|||||||||||.|||..||
BL00497___yvd 977 GTTTGGATGTGGCAAATGAAGTTGATCATGCGTTTTGGAAGAAATTCCGG 1026
BSNT_05273___ 1024 CAGGCTGTATCAGCAGAAAATCCTGATGTTTATATTTTAGGTGAGATCTG 1073
||.||.||..|.||||||||.||.||..|||.|||.||.||.||.|||||
BL00497___yvd 1027 CAAGCCGTCACGGCAGAAAAGCCCGACATTTTTATATTGGGCGAAATCTG 1076
BSNT_05273___ 1074 GCATTCTGCCGAACCCTGGCTTAGAGGGGATGAATTTCATGCGGCGATGA 1123
||||...||.||.||.|||||||||||.||.|||||||||.|||..||||
BL00497___yvd 1077 GCATCAGGCTGATCCGTGGCTTAGAGGAGACGAATTTCATTCGGTCATGA 1126
BSNT_05273___ 1124 ATTACCCTTTTACAGAGCCTATGATTGAATATTTTGCTGACCGGA-CGAT 1172
|.|||||.||.|||||.||.||||||||.||||||||.|| |||| ||||
BL00497___yvd 1127 ACTACCCGTTCACAGAACCGATGATTGACTATTTTGCAGA-CGGATCGAT 1175
BSNT_05273___ 1173 TCCAGCCTCACGTATGGCTCA-CCGTGTCAATGCACATTTGATGAATGGA 1221
|.||||.||.|..||||| || |||..|||||.|.|||||.||||..||.
BL00497___yvd 1176 TTCAGCTTCGCAAATGGC-CAGCCGCATCAATTCGCATTTAATGAGCGGG 1224
BSNT_05273___ 1222 ATGAAGCAGGCCAATGAGGTGATGTTTAATTTACTGGATAGCCAT---AC 1268
||||||||||.|||||||||||||||||||||.|||||.||.||| ||
BL00497___yvd 1225 ATGAAGCAGGTCAATGAGGTGATGTTTAATTTGCTGGACAGTCATGACAC 1274
BSNT_05273___ 1269 AAAGCGCCTTTTGACCAGATGCCGCAATGATGAGAAGAAAGCACGCGCGT 1318
.|||||..|||||||.||||||.|....|||||.||.||.|..|||.|..
BL00497___yvd 1275 GAAGCGGATTTTGACAAGATGCGGAGGAGATGACAAAAAGGTGCGCTCTC 1324
BSNT_05273___ 1319 TGCTGGCCTTTATGTTTGCCCAGACAGGCTCACCATGCATCTATTACGGG 1368
|..||||.||.||||||||.|||||||||||.||.|||||.||||||||.
BL00497___yvd 1325 TTTTGGCATTCATGTTTGCTCAGACAGGCTCGCCGTGCATTTATTACGGA 1374
BSNT_05273___ 1369 ACGGAAATCGGGCTGGACGGCGAAAATGATCCATTATGCCGGAAATGTAT 1418
||||||.|||||||.|||||||...||||||||||.||||||||.||.||
BL00497___yvd 1375 ACGGAAGTCGGGCTTGACGGCGGCGATGATCCATTGTGCCGGAAGTGCAT 1424
BSNT_05273___ 1419 GGTTTGGGAAAAGGAGAAGCAAAACCAAGACATGCTGCG-ATTTATGAAA 1467
||||||||||.||||.||.||.||.|||||.||||| || ||||||||||
BL00497___yvd 1425 GGTTTGGGAAGAGGAAAAACAGAATCAAGAGATGCT-CGCATTTATGAAA 1473
BSNT_05273___ 1468 CGGTTAATTGCTTTACGCAAGCAGGAAAACACTTTATTGACTGAAGGACA 1517
|||.|.||.|||||.||.||.||.||.||...|.||||||||.|.||...
BL00497___yvd 1474 CGGCTGATCGCTTTGCGAAAACAAGAGAATGATGTATTGACTTATGGCGC 1523
BSNT_05273___ 1518 TCTTGAGTGGAATCTGCTGGACGACAAAAATGATTTTATTAGCTTTTCGC 1567
.|||||||||||.|||.|.||.|||.||||.||||||.|.||.|||||.|
BL00497___yvd 1524 GCTTGAGTGGAAGCTGGTTGATGACCAAAACGATTTTGTCAGTTTTTCTC 1573
BSNT_05273___ 1568 GGACTCTTGATGAAAAAATACTGATTTATTTCTTTAATCAAGGGAATGCG 1617
|.||.|.|||.|.||||...|||||.||.|||||..|.||.||.|..|.|
BL00497___yvd 1574 GAACGCATGAAGGAAAAGAGCTGATCTACTTCTTCCACCAGGGCAGCGAG 1623
BSNT_05273___ 1618 GTTCAACACGTCAGTTTACGAGAGTTGAATATTGATAGGAATAAGAAAAT 1667
||.|..|..|||||.||.||.||.|||||.||||..||..||||.|.|||
BL00497___yvd 1624 GTGCGCCGTGTCAGATTGCGGGATTTGAAGATTGCAAGCGATAAAAGAAT 1673
BSNT_05273___ 1668 CTGTGATGCATGGACAG-AGCAGCCGCTTCATCATCACGATGTCATTGCT 1716
.|..|||||.|||||.| ||.|| |||||||.|||.|.|||||..|.|..
BL00497___yvd 1674 ATACGATGCGTGGACGGAAGAAG-CGCTTCAGCATGATGATGTGGTCGAC 1722
BSNT_05273___ 1717 GTTCAGCCGGGAGAATTTTTGATTTTGAGTGCTGCCGCCCCTGTATAA 1764
.|||||||.||.|.||||||.||||||.|.| |.||.|||
BL00497___yvd 1723 ATTCAGCCAGGCGGATTTTTCATTTTGGGGG---------CGGTCTAA 1761
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