Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05266 and BL00494

See DNA alignment / Visit BSNT_05266 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence pep-align/BSNT_05266___yvdI.1.5803.seq
#    -bsequence pep-align/BL00494___mdxG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05266___yvdI-BL00494___mdxG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05266___yvdI-BL00494___mdxG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05266___yvdI
# 2: BL00494___mdxG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     253/283 (89.4%)
# Similarity:   262/283 (92.6%)
# Gaps:           5/283 ( 1.8%)
# Score: 1295.0
# 
#
#=======================================

BSNT_05266___      1 -----MNASTARMLNKICTYLFLTLLSIVIIYPLLITASSAFRVGNSAAF     45
                          .|.....||||:.||:||..|||||||||||||||||||||.|||
BL00494___mdx      1 MRGLFKNTRFTGMLNKVLTYIFLAFLSIVIIYPLLITASSAFRVGNVAAF     50

BSNT_05266___     46 QLDFSGPWTLDHFKRLFDETLYLHWYSNTLVIALSVMVLQVTIVTLAGYS     95
                     .|||||.||||||||||:|||||:||.|||||||||||.||||||||||:
BL00494___mdx     51 TLDFSGAWTLDHFKRLFEETLYLNWYGNTLVIALSVMVFQVTIVTLAGYT    100

BSNT_05266___     96 YSRYRFAGRKKSLIFFLIIQMVPTMAALTAFYVLAMLIGALDQYWFLTAI    145
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL00494___mdx    101 YSRYRFAGRKKSLIFFLIIQMVPTMAALTAFYVLAMLIGALDQYWFLTAI    150

BSNT_05266___    146 YIGGGIPMNTWLMKGYFDTVPREIDEAARIDGAGHLRIFASIVLPLVKPM    195
                     |||||||||||||||||||||||||||||||||||||||||:||||||||
BL00494___mdx    151 YIGGGIPMNTWLMKGYFDTVPREIDEAARIDGAGHLRIFASVVLPLVKPM    200

BSNT_05266___    196 LAVQALWAFMAPFGDYLLAKFLLRSPERLTIAVGLQSFISNPQQQKVALF    245
                     ||||||||||.||||||||||||||||.||||||||:|||||||||||||
BL00494___mdx    201 LAVQALWAFMGPFGDYLLAKFLLRSPESLTIAVGLQTFISNPQQQKVALF    250

BSNT_05266___    246 AAGAILAALPICVLFFFLQKNFVSGLTAGGTKG    278
                     ||||||||||||:||||||||||||||:|||||
BL00494___mdx    251 AAGAILAALPICILFFFLQKNFVSGLTSGGTKG    283


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.