Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05266 and BL00494

See Amino acid alignment / Visit BSNT_05266 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence dna-align/BSNT_05266___yvdI.1.5803.seq
#    -bsequence dna-align/BL00494___mdxG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05266___yvdI-BL00494___mdxG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05266___yvdI-BL00494___mdxG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05266___yvdI
# 2: BL00494___mdxG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 857
# Identity:     692/857 (80.7%)
# Similarity:   692/857 (80.7%)
# Gaps:          25/857 ( 2.9%)
# Score: 2831.5
# 
#
#=======================================

BSNT_05266___      1 --GTGA---------------ACGCGAG--CACTGCCAGAATGCTTAATA     31
                       |.||               ||||| |  ||   ||.|.|||||.||.|
BL00494___mdx      1 ATGAGAGGGCTTTTTAAAAATACGCG-GTTCA---CCGGGATGCTGAACA     46

BSNT_05266___     32 AAATCTGTACGTATTTATTTTTGACGCTTTTAAGTATTGTCATTATATAT     81
                     |..|.|..||.|||.||||||||.||.|||||||.||.||.|||||.|||
BL00494___mdx     47 AGGTTTTGACCTATATATTTTTGGCGTTTTTAAGCATCGTGATTATTTAT     96

BSNT_05266___     82 CCGTTGCTGATTACGGCATCATCAGCCTTCCGTGTGGGGAATTCGGCGGC    131
                     |||.|..||||.||.||||||||.||.|||||.||.||||||...|||||
BL00494___mdx     97 CCGCTTTTGATCACAGCATCATCCGCATTCCGGGTCGGGAATGTAGCGGC    146

BSNT_05266___    132 TTTT-CAGCTCGATTTTTCGGGTCCTTGGACATTGGATCATTTTAAGCGG    180
                     |||| || ||||||||||||||..|.|||||||||||.||.|||||||||
BL00494___mdx    147 TTTTACA-CTCGATTTTTCGGGCGCATGGACATTGGACCACTTTAAGCGG    195

BSNT_05266___    181 CTATTTGACGAAACGCTTTATCTTCATTGGTACAGCAATACACTTGTCAT    230
                     ||.|||||.||.||||||||.||..||||||||.|.|||||||||||.||
BL00494___mdx    196 CTGTTTGAAGAGACGCTTTACCTCAATTGGTACGGGAATACACTTGTGAT    245

BSNT_05266___    231 CGCGCTATCGGTCATGGTTTTGCAGGTTACAATCGTGACACTTGCCGGGT    280
                     |||.||.||.||||||||.||.|||||.||.||.|||||.||||||||.|
BL00494___mdx    246 CGCTCTGTCTGTCATGGTGTTCCAGGTGACGATTGTGACGCTTGCCGGCT    295

BSNT_05266___    281 ACTCGTACAGCCGCTATCGGTTTGCAGGCAGAAAAAAGAGCCTGATATTC    330
                     |..|||||||||||||.||||||||.|||.|||||||||||||.||.|||
BL00494___mdx    296 ATACGTACAGCCGCTACCGGTTTGCGGGCCGAAAAAAGAGCCTCATTTTC    345

BSNT_05266___    331 TTTTTAATCATTCAAATGGTGCCAACAATGGCGGCGCTGACTGCTTTTTA    380
                     |||||.|||||||||||||||||.||.||||||||||||||.||||||||
BL00494___mdx    346 TTTTTGATCATTCAAATGGTGCCGACGATGGCGGCGCTGACCGCTTTTTA    395

BSNT_05266___    381 TGTCTTGGCGATGCTAATAGGCGCACTCGATCAATACTGGTTTTTAACAG    430
                     .|||.||||.|||||.||.||.||..|.||.|||||.|||||||||||.|
BL00494___mdx    396 CGTCCTGGCCATGCTGATCGGAGCTTTGGACCAATATTGGTTTTTAACTG    445

BSNT_05266___    431 CGATCTATATCGGCGGCGGAATTCCGATGAACACGTGGCTGATGAAAGGT    480
                     |.||||||||||||||||||||||||||||||||.|||||||||||.||.
BL00494___mdx    446 CAATCTATATCGGCGGCGGAATTCCGATGAACACATGGCTGATGAAGGGC    495

BSNT_05266___    481 TATTTTGATACTGTGCCGAGAGAAATTGATGAAGCCGCGCGAATTGACGG    530
                     ||.||||||||.||||||||||||||.||||||||.|||||||||||.||
BL00494___mdx    496 TACTTTGATACAGTGCCGAGAGAAATCGATGAAGCGGCGCGAATTGATGG    545

BSNT_05266___    531 AGCGGGACATCTGAGGATTTTCGCTTCAATTGTTCTGCCGCTTGTTAAGC    580
                     ||||||.||.|||.||||.||.|||||..|.|||||.||||||||.||.|
BL00494___mdx    546 AGCGGGGCACCTGCGGATCTTTGCTTCGGTCGTTCTCCCGCTTGTGAAAC    595

BSNT_05266___    581 CAATGCTCGCGGTGCAAGCGCTTTGGGCATTTATGGCACCGTTTGGCGAT    630
                     |.|||||.||.||.||.|||||.|||||.|||||||..|||||.|||||.
BL00494___mdx    596 CGATGCTTGCAGTCCAGGCGCTGTGGGCGTTTATGGGGCCGTTCGGCGAC    645

BSNT_05266___    631 TATTTGCTGGCGAAATTTCTGCTTCGCTCACCGGAAAGGCTGACCATCGC    680
                     |||.||||||||||||||||||||||.||.||||||||.|||||||||||
BL00494___mdx    646 TATCTGCTGGCGAAATTTCTGCTTCGGTCGCCGGAAAGCCTGACCATCGC    695

BSNT_05266___    681 TGTAGGATTACAATCCTTTATTTCTAATCCGCAGCAGCAAAAAGTAGCTC    730
                     .||.||.||.||..|.||.||.||.||||||||||||||||||||.||.|
BL00494___mdx    696 CGTCGGTTTGCAGACATTCATCTCCAATCCGCAGCAGCAAAAAGTCGCGC    745

BSNT_05266___    731 TATTTGCGGCTGGTGCCATCCTTGCCGCACTGCCGATATGCGTTCTATTC    780
                     |.|||||.|||||.||.||.|||||.||.||||||||.|||.|..|.|||
BL00494___mdx    746 TGTTTGCAGCTGGGGCGATTCTTGCAGCTCTGCCGATTTGCATCTTGTTC    795

BSNT_05266___    781 TTTTTTCTCCAAAAGAACTTTGTGTCCGGTTTGACAGCCGGCGGAACAAA    830
                     ||.|||||||||||||||||||||||||||||||||.||||||||||.||
BL00494___mdx    796 TTCTTTCTCCAAAAGAACTTTGTGTCCGGTTTGACATCCGGCGGAACGAA    845

BSNT_05266___    831 GGGGTAA    837
                     |||.|||
BL00494___mdx    846 GGGATAA    852


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.