Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05266 and BL00494
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:22
# Commandline: needle
# -asequence dna-align/BSNT_05266___yvdI.1.5803.seq
# -bsequence dna-align/BL00494___mdxG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05266___yvdI-BL00494___mdxG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05266___yvdI-BL00494___mdxG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05266___yvdI
# 2: BL00494___mdxG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 857
# Identity: 692/857 (80.7%)
# Similarity: 692/857 (80.7%)
# Gaps: 25/857 ( 2.9%)
# Score: 2831.5
#
#
#=======================================
BSNT_05266___ 1 --GTGA---------------ACGCGAG--CACTGCCAGAATGCTTAATA 31
|.|| ||||| | || ||.|.|||||.||.|
BL00494___mdx 1 ATGAGAGGGCTTTTTAAAAATACGCG-GTTCA---CCGGGATGCTGAACA 46
BSNT_05266___ 32 AAATCTGTACGTATTTATTTTTGACGCTTTTAAGTATTGTCATTATATAT 81
|..|.|..||.|||.||||||||.||.|||||||.||.||.|||||.|||
BL00494___mdx 47 AGGTTTTGACCTATATATTTTTGGCGTTTTTAAGCATCGTGATTATTTAT 96
BSNT_05266___ 82 CCGTTGCTGATTACGGCATCATCAGCCTTCCGTGTGGGGAATTCGGCGGC 131
|||.|..||||.||.||||||||.||.|||||.||.||||||...|||||
BL00494___mdx 97 CCGCTTTTGATCACAGCATCATCCGCATTCCGGGTCGGGAATGTAGCGGC 146
BSNT_05266___ 132 TTTT-CAGCTCGATTTTTCGGGTCCTTGGACATTGGATCATTTTAAGCGG 180
|||| || ||||||||||||||..|.|||||||||||.||.|||||||||
BL00494___mdx 147 TTTTACA-CTCGATTTTTCGGGCGCATGGACATTGGACCACTTTAAGCGG 195
BSNT_05266___ 181 CTATTTGACGAAACGCTTTATCTTCATTGGTACAGCAATACACTTGTCAT 230
||.|||||.||.||||||||.||..||||||||.|.|||||||||||.||
BL00494___mdx 196 CTGTTTGAAGAGACGCTTTACCTCAATTGGTACGGGAATACACTTGTGAT 245
BSNT_05266___ 231 CGCGCTATCGGTCATGGTTTTGCAGGTTACAATCGTGACACTTGCCGGGT 280
|||.||.||.||||||||.||.|||||.||.||.|||||.||||||||.|
BL00494___mdx 246 CGCTCTGTCTGTCATGGTGTTCCAGGTGACGATTGTGACGCTTGCCGGCT 295
BSNT_05266___ 281 ACTCGTACAGCCGCTATCGGTTTGCAGGCAGAAAAAAGAGCCTGATATTC 330
|..|||||||||||||.||||||||.|||.|||||||||||||.||.|||
BL00494___mdx 296 ATACGTACAGCCGCTACCGGTTTGCGGGCCGAAAAAAGAGCCTCATTTTC 345
BSNT_05266___ 331 TTTTTAATCATTCAAATGGTGCCAACAATGGCGGCGCTGACTGCTTTTTA 380
|||||.|||||||||||||||||.||.||||||||||||||.||||||||
BL00494___mdx 346 TTTTTGATCATTCAAATGGTGCCGACGATGGCGGCGCTGACCGCTTTTTA 395
BSNT_05266___ 381 TGTCTTGGCGATGCTAATAGGCGCACTCGATCAATACTGGTTTTTAACAG 430
.|||.||||.|||||.||.||.||..|.||.|||||.|||||||||||.|
BL00494___mdx 396 CGTCCTGGCCATGCTGATCGGAGCTTTGGACCAATATTGGTTTTTAACTG 445
BSNT_05266___ 431 CGATCTATATCGGCGGCGGAATTCCGATGAACACGTGGCTGATGAAAGGT 480
|.||||||||||||||||||||||||||||||||.|||||||||||.||.
BL00494___mdx 446 CAATCTATATCGGCGGCGGAATTCCGATGAACACATGGCTGATGAAGGGC 495
BSNT_05266___ 481 TATTTTGATACTGTGCCGAGAGAAATTGATGAAGCCGCGCGAATTGACGG 530
||.||||||||.||||||||||||||.||||||||.|||||||||||.||
BL00494___mdx 496 TACTTTGATACAGTGCCGAGAGAAATCGATGAAGCGGCGCGAATTGATGG 545
BSNT_05266___ 531 AGCGGGACATCTGAGGATTTTCGCTTCAATTGTTCTGCCGCTTGTTAAGC 580
||||||.||.|||.||||.||.|||||..|.|||||.||||||||.||.|
BL00494___mdx 546 AGCGGGGCACCTGCGGATCTTTGCTTCGGTCGTTCTCCCGCTTGTGAAAC 595
BSNT_05266___ 581 CAATGCTCGCGGTGCAAGCGCTTTGGGCATTTATGGCACCGTTTGGCGAT 630
|.|||||.||.||.||.|||||.|||||.|||||||..|||||.|||||.
BL00494___mdx 596 CGATGCTTGCAGTCCAGGCGCTGTGGGCGTTTATGGGGCCGTTCGGCGAC 645
BSNT_05266___ 631 TATTTGCTGGCGAAATTTCTGCTTCGCTCACCGGAAAGGCTGACCATCGC 680
|||.||||||||||||||||||||||.||.||||||||.|||||||||||
BL00494___mdx 646 TATCTGCTGGCGAAATTTCTGCTTCGGTCGCCGGAAAGCCTGACCATCGC 695
BSNT_05266___ 681 TGTAGGATTACAATCCTTTATTTCTAATCCGCAGCAGCAAAAAGTAGCTC 730
.||.||.||.||..|.||.||.||.||||||||||||||||||||.||.|
BL00494___mdx 696 CGTCGGTTTGCAGACATTCATCTCCAATCCGCAGCAGCAAAAAGTCGCGC 745
BSNT_05266___ 731 TATTTGCGGCTGGTGCCATCCTTGCCGCACTGCCGATATGCGTTCTATTC 780
|.|||||.|||||.||.||.|||||.||.||||||||.|||.|..|.|||
BL00494___mdx 746 TGTTTGCAGCTGGGGCGATTCTTGCAGCTCTGCCGATTTGCATCTTGTTC 795
BSNT_05266___ 781 TTTTTTCTCCAAAAGAACTTTGTGTCCGGTTTGACAGCCGGCGGAACAAA 830
||.|||||||||||||||||||||||||||||||||.||||||||||.||
BL00494___mdx 796 TTCTTTCTCCAAAAGAACTTTGTGTCCGGTTTGACATCCGGCGGAACGAA 845
BSNT_05266___ 831 GGGGTAA 837
|||.|||
BL00494___mdx 846 GGGATAA 852
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