Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05264 and BL00493

See DNA alignment / Visit BSNT_05264 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence pep-align/BSNT_05264___yvdJ.1.5803.seq
#    -bsequence pep-align/BL00493___yvdJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05264___yvdJ-BL00493___yvdJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05264___yvdJ-BL00493___yvdJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05264___yvdJ
# 2: BL00493___yvdJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     155/299 (51.8%)
# Similarity:   207/299 (69.2%)
# Gaps:          11/299 ( 3.7%)
# Score: 797.5
# 
#
#=======================================

BSNT_05264___      1 MKNLENKSFIIRCLKAAASPSGVCSYGNTFSWLQLSFLFMFLTACLMAPL     50
                     |.::.|:..|:|.|||||||:||....:.||||::||||||||||||||:
BL00493___yvd      1 MNDMRNEKLIVRFLKAAASPAGVMRCKHAFSWLEISFLFMFLTACLMAPM     50

BSNT_05264___     51 AVSFVKMDRFSVASFMPSAIQGVNDQFADQLQGFQIRNGKLTGGKSSERI    100
                     .::|:|||||:....:|:..|..:..|..||:|:|:.||:|.|.....|:
BL00493___yvd     51 TLAFMKMDRFNAGYLIPNVAQEADAAFIKQLKGYQLTNGRLKGEDELYRV    100

BSNT_05264___    101 EDGQNVMAVDMKHEYETSGENGRLKVTGFENAVIFQPDQLVITDQNETGF    150
                     |.|:.::|||:|.|.:|||||||:|..|::||:|||.|.|:|:||:..||
BL00493___yvd    101 EKGRTLLAVDLKDELKTSGENGRIKAEGYQNALIFQSDHLIISDQSGAGF    150

BSNT_05264___    151 SVGYAKMDVKLEKPNVHDVEV-----LIDTLWLAQYKPMIMMLAYTVVSM    195
                     ||.|.      .|..::|::.     .|..:|.|||||:|:|||.:.|.:
BL00493___yvd    151 SVRYP------AKAGLNDLDAGHLGDFIGAMWFAQYKPLIIMLACSAVFI    194

BSNT_05264___    196 IQLLLTFVLAGGLWITKISNMVSIASFKEAVSTAICASALPAFAAAAIGM    245
                     |.|.||.|||||:||:|.|||..|.|||||.:.|:|.|||||.||.|.||
BL00493___yvd    195 ISLFLTAVLAGGIWISKKSNMTGIRSFKEAAAAAVCGSALPAGAAMAFGM    244

BSNT_05264___    246 VHFDLITVLMIHSCGVTLMISFAFRYLTKTRRDNGNLHSGGNDDKSAVI    294
                     :.||.|.:|:|||||..||:||.||::.|.|..|.||.||||..|||.|
BL00493___yvd    245 ISFDFIAMLLIHSCGSALMVSFIFRHIFKNRHHNENLQSGGNHGKSAAI    293


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