Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05260 and BL00490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence pep-align/BSNT_05260___pgcM.1.5803.seq
# -bsequence pep-align/BL00490___pgcM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05260___pgcM-BL00490___pgcM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05260___pgcM-BL00490___pgcM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05260___pgcM
# 2: BL00490___pgcM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 154/226 (68.1%)
# Similarity: 178/226 (78.8%)
# Gaps: 2/226 ( 0.9%)
# Score: 773.0
#
#
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BSNT_05260___ 1 MKAVIFDLDGVITDTAEYHFLAWKHIAEQINIPFDRDMNERLKGISREES 50
|||||||||||||||||||:|||||.||||.|..||..|||||||:||:|
BL00490___pgc 1 MKAVIFDLDGVITDTAEYHYLAWKHTAEQIGIEIDRSFNERLKGINREQS 50
BSNT_05260___ 51 LESILISGGAETKYTNAEKQELMHRKNHDYQTLISKLTPEDLLPGIGRLL 100
|:.|||.|||..|:..|||||:|.|||..||.||..|||.||||||..|.
BL00490___pgc 51 LDKILIHGGAAGKFQEAEKQEIMRRKNQYYQQLIQNLTPHDLLPGISVLF 100
BSNT_05260___ 101 CQLKNENIKIGLASSSRNAPKILRRLAIIDDFDAIVDPTALAQGKPDPDI 150
.:||.|:|.|.|||||||||.||:||.::|:|..:|||.|||.|||||:|
BL00490___pgc 101 AELKREHISIALASSSRNAPAILQRLGVMDEFQGVVDPAALAHGKPDPEI 150
BSNT_05260___ 151 FLTAAALLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLV 200
||||||||.|.|::|||||||||||:|||||||||||||....:.||||:
BL00490___pgc 151 FLTAAALLGVPPSECAAIEDAEAGIAAIKSAGMFAVGVGDETSLRGADLI 200
BSNT_05260___ 201 VRQTNDLTLELLHEEWEQY-RIKSV- 224
|..||:||.|||:|.|::| .|:..
BL00490___pgc 201 VHNTNELTFELLNEGWQRYCCIREGK 226
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