Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05881 and BL00483

See DNA alignment / Visit BSNT_05881 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:57
# Commandline: needle
#    -asequence pep-align/BSNT_05881___ywaE.1.5803.seq
#    -bsequence pep-align/BL00483___ywaE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05881___ywaE-BL00483___ywaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05881___ywaE-BL00483___ywaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05881___ywaE
# 2: BL00483___ywaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 171
# Identity:     135/171 (78.9%)
# Similarity:   144/171 (84.2%)
# Gaps:           3/171 ( 1.8%)
# Score: 664.0
# 
#
#=======================================

BSNT_05881___      1 MERSHQHQQLRKEEHDTLSKLKQMPVESLNLEAISIATNLYRSAQRLRVK     50
                     |.||   ..||:||||||||||:||:|||||||||:|||||||||:||||
BL00483___ywa      1 MNRS---PHLRQEEHDTLSKLKRMPIESLNLEAISVATNLYRSAQKLRVK     47

BSNT_05881___     51 METEVLSSYNLSWTAFSILYDLWVWGALETRKIAELSGISTATASNVIKT    100
                     |||||||||.||||||||||||||||.|||||:|||||||||||||||||
BL00483___ywa     48 METEVLSSYQLSWTAFSILYDLWVWGRLETRKLAELSGISTATASNVIKT     97

BSNT_05881___    101 LEKKSFCRKSIDTRDRRLVFVSITDSGKQAIEELYPEFHKGETELIAGMT    150
                     ||||:||.||.|.||||.|:..||..||.|||||||.||||||.||.|||
BL00483___ywa     98 LEKKNFCVKSADPRDRRHVYAEITPEGKAAIEELYPAFHKGETMLIKGMT    147

BSNT_05881___    151 KDEQKILTGLLRKVADNLHTT    171
                     |:||..|..|||||.||||..
BL00483___ywa    148 KEEQNTLIELLRKVNDNLHKP    168


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