Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03836 and BL00467

See DNA alignment / Visit BSNT_03836 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence pep-align/BSNT_03836.1.5803.seq
#    -bsequence pep-align/BL00467___yybE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03836-BL00467___yybE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03836-BL00467___yybE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03836
# 2: BL00467___yybE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     124/299 (41.5%)
# Similarity:   184/299 (61.5%)
# Gaps:           3/299 ( 1.0%)
# Score: 593.0
# 
#
#=======================================

BSNT_03836         1 MEWEQLEYFQTLARIQHVTKAAETLSITQPALSRSIVRLENHLGVPLFDR     50
                     ||..|:::|..::|.:|.||||....|:||||||||.:||..||||||.|
BL00467___yyb      1 MELYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIR     50

BSNT_03836        51 QGRSIKLNKYGEIFLKRVDSMIREYTEGKEEIQSLLKPDQGEVSLGFLHT    100
                     :.:||:|.||||.||.:.........||.::|:..:.|:.||:|:.||||
BL00467___yyb     51 KTKSIRLTKYGEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHT    100

BSNT_03836       101 LGTTIVPNLIGTFKDNYPKVQFQLNQSHSNLLLDKLKSGELDLCLLASFP    150
                     ||:.::|.||..||..||.|.|:|.|:.:..|...:::||.|:||.:...
BL00467___yyb    101 LGSRLMPQLIAEFKKKYPNVAFRLYQAANEHLQHMVETGEADICLSSPPL    150

BSNT_03836       151 VESNIMWKPLWKEELFLFLPKKHVLATREDITLNEIANEPFVLMKEGFAL    200
                     ...::.|..|..|.|:|.||..|.||.|:::.:..||:|.||..|.|:.|
BL00467___yyb    151 PNEHLEWTVLDTEPLYLVLPADHPLADRKEVAIRSIAHEDFVCFKPGYGL    200

BSNT_03836       201 RVTIDDIFEQVNITPNIVFEGEEATTIAGFVAAGLGVSILPDFKGLDQTN    250
                     |...|.:...::|:|.:.|||||.:||.|.|:|||||:|||.......:.
BL00467___yyb    201 RYVFDQMCRGLSISPKLAFEGEEVSTILGLVSAGLGVAILPKTAEHVHSP    250

BSNT_03836       251 IAKVRISWPRFERTVGLSWIKGKHLSPVTENFKQYIINQFPQIDSI---    296
                     :|..|:|..|.|||:||:.:|..:|||...|||:::|..:.:.:..   
BL00467___yyb    251 VAFCRVSDYRSERTIGLAVLKDHYLSPAARNFKEFVIEYYRRNERSDQP    299


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