Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00984 and BL00455
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_00984___ydhD.1.5803.seq
# -bsequence pep-align/BL00455___ydhD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00984___ydhD-BL00455___ydhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00984___ydhD-BL00455___ydhD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00984___ydhD
# 2: BL00455___ydhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 241/420 (57.4%)
# Similarity: 316/420 (75.2%)
# Gaps: 1/420 ( 0.2%)
# Score: 1358.0
#
#
#=======================================
BSNT_00984___ 1 MFIHIVGPGDSLFSIGRRYGASVDQIRGVNGLDETNIVPGQALLIPLYVY 50
|||:.|.||||||.||.::|.|:||||..|||..||||||||||||||.|
BL00455___ydh 1 MFIYTVQPGDSLFVIGAKFGISIDQIRLANGLIATNIVPGQALLIPLYTY 50
BSNT_00984___ 51 TVQPGDTLTAIAAKAFVPLERLRAANPGISPNALQAGAKITIPSISNYIA 100
||||||:...||.:.||.:|.|:.|||.::|:.::.|.|:.||.:.....
BL00455___ydh 51 TVQPGDSYYTIARRTFVSVEALQKANPSVTPSNMRPGIKVMIPELPKKPI 100
BSNT_00984___ 101 GTLSFYVLRNPDLDRELINDYAPYSSSISIFEYHIAPNGDIANQLNDAAA 150
..|.:|.||||.||:|||:::|||::.::.|||||:.:|.: ::|||:.|
BL00455___ydh 101 TALGYYTLRNPRLDQELIHNFAPYATYLAFFEYHISSDGSL-SELNDSPA 149
BSNT_00984___ 151 IETTWQRRVTPLATITNLTSGGFSTEIVHQVLNNPTARTNLVNNIYDLVS 200
::|.|:|||.||.|:||||..|||..:.|:|||.|..|..|::||...:|
BL00455___ydh 150 VQTAWRRRVPPLMTVTNLTESGFSPSLAHRVLNQPAVRNRLIDNIVQTIS 199
BSNT_00984___ 201 TRGYGGVTIDFEQVSAADRDLFTGFLRQLRDRLQAGGYVLTIAVPAKTSD 250
.:||.||.|||||:...|||||:||||.|::||:..|||||||||.||::
BL00455___ydh 200 RKGYAGVNIDFEQILEEDRDLFSGFLRLLKERLKPSGYVLTIAVPPKTNE 249
BSNT_00984___ 251 NIPWLRGYDYGGIGAVVNYMFIMAYDWHHAGSEPGPVAPITEIRRTIEFT 300
||.||:||||||||||.:.:|||||||||..|||||:|||.|:|:||:|.
BL00455___ydh 250 NIAWLKGYDYGGIGAVSDLIFIMAYDWHHGTSEPGPIAPINEVRQTIQFA 299
BSNT_00984___ 301 IAQVPSRKIIIGVPLYGYDWIIPYQPGTVASAISNQNAIERAMRYQSPIQ 350
:..||..||::|.|||||:|.:|||||.|...|:||:|::.||::|:|||
BL00455___ydh 300 LRHVPKEKIVLGFPLYGYNWTLPYQPGAVYPGIANQDAVQLAMKHQAPIQ 349
BSNT_00984___ 351 YSAEYQSPFFRYSDQQGRTHEVWFEDVRSMSRKMQIVREYRLQAIGAWQL 400
|....:||||||:|:|||.|.|||||.||:.:|:|::.||.|...|.|||
BL00455___ydh 350 YDTNSESPFFRYTDEQGRRHVVWFEDARSIGKKLQLITEYGLDGGGVWQL 399
BSNT_00984___ 401 TLGFTPGPWLLRKFFTIRKV 420
||.|..|.|||.|||.:|||
BL00455___ydh 400 TLSFPQGTWLLTKFFRVRKV 419
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