Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03913 and BL00454

See DNA alignment / Visit BSNT_03913 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence pep-align/BSNT_03913___yraD.1.5803.seq
#    -bsequence pep-align/BL00454___yraD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03913___yraD-BL00454___yraD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03913___yraD-BL00454___yraD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03913___yraD
# 2: BL00454___yraD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 99
# Identity:      49/99 (49.5%)
# Similarity:    72/99 (72.7%)
# Gaps:           0/99 ( 0.0%)
# Score: 269.0
# 
#
#=======================================

BSNT_03913___      1 MNPIIEYLTGMNVLTDQIIAMDLLISAKNGVRNYAMAATEAGTPEVKEVL     50
                     ||..|:.:|||..:|:|:||.|.|||||.||:|.|.|.||..:|||:|.|
BL00454___yra      1 MNEFIQNMTGMGAMTEQVIATDFLISAKTGVKNIATAITETSSPEVRETL     50

BSNT_03913___     51 IRHLEEALDMHEQLSSYMMEKGWYHPWNTDEQVKLNLQNIDTAIQLPTL     99
                     .::|.:|:|.|||:::||:.||:|||.|..||::::.:..:||..||.|
BL00454___yra     51 KQYLNDAIDTHEQITNYMISKGYYHPANLSEQIQIDTKAAETAKDLPQL     99


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.