Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04317 and BL00435

See DNA alignment / Visit BSNT_04317 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence pep-align/BSNT_04317___ytrP.1.5803.seq
#    -bsequence pep-align/BL00435___ytrP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04317___ytrP-BL00435___ytrP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04317___ytrP-BL00435___ytrP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04317___ytrP
# 2: BL00435___ytrP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity:     288/579 (49.7%)
# Similarity:   397/579 (68.6%)
# Gaps:          13/579 ( 2.2%)
# Score: 1422.0
# 
#
#=======================================

BSNT_04317___      1 MVEQTKDQLSAFHYHMLDFLLTKSEKVTFTDSFIWLTSAIQTYFSTLCVS     50
                     |.:||:|....||..:..|.| |...|::.||..||.:|.:::||.:.::
BL00435___ytr      1 MNKQTEDLYLTFHQKLFQFFL-KKPAVSYDDSVAWLKAAAESFFSFISLT     49

BSNT_04317___     51 LTPSSSDFVTKQADGEARFSASKINASCYLIEDGSGRCFHLACRQDEEIP    100
                     :.|||. ....:.||:.....|..: :...||:.| :...|:|::..::|
BL00435___ytr     50 VQPSSR-LQGSRGDGDPIRRVSDYH-TIITIEENS-KYIELSCQKKHKLP     96

BSNT_04317___    101 EGLPDVVASFLNQSMKQERLYNKTIYQKKIYKMTELFHSLLDQTDVLKQL    150
                     |.|.:.:..||...::.:.|:...:.:.|||:.|||.|.|:||..|||.:
BL00435___ytr     97 ERLAESIHLFLVHCLELDALFRDELKKTKIYEKTELLHELMDQEQVLKTM    146

BSNT_04317___    151 LESLTSTFSLFEFSLFISHDQDQCLGIPAKELYMEGEKSDSFALKVYLSG    200
                     ||||.|.|....:.||:|:|:||.:.:||.||.::.|.:|||||:.||||
BL00435___ytr    147 LESLRSVFPFLTYCLFLSYDEDQYINLPAIELDVQSESTDSFALEAYLSG    196

BSNT_04317___    201 DILRKNESAAYIPIKGQQGTYGVLKAEGTGDSFLADACLDEMSMLANAAG    250
                     ....|||:..||||||:|||||||||.|.|   .||...| :.:::||||
BL00435___ytr    197 QEKSKNEAEVYIPIKGRQGTYGVLKAFGPG---AADTAAD-ICIISNAAG    242

BSNT_04317___    251 KAFENAQLYEQSKASIANLELINETSRRLNQRLTLTDTMNDLAVRMAESF    300
                     |||||::|||||:..|:|||||||||.:||:...|.|.|..|:.|:..||
BL00435___ytr    243 KAFENSRLYEQSQNMISNLELINETSHQLNRTKRLPDMMKSLSERLISSF    292

BSNT_04317___    301 QAEEVGFFHIDHFENLTLLPGSTAFFKEAKQSDFYNELKEKLYEGEKGVF    350
                     .|||||||:.:|....||||.||:||:..:...:...:|||:.| |.|||
BL00435___ytr    293 GAEEVGFFYKNHLGKETLLPESTSFFQTDEALPYIRYVKEKISE-ENGVF    341

BSNT_04317___    351 IGNGQSVFGKAGYGSLMAAPMIQNDRLLGFAVLLKQELYAFTFEMYKLFQ    400
                     :|||.|:||..||.|||..||::|:...||.::||:.:.:|:|||:||||
BL00435___ytr    342 VGNGSSLFGNEGYASLMGVPMLENNENKGFVIVLKKNVCSFSFEMFKLFQ    391

BSNT_04317___    401 ALIHHATLAVTNSMLRDRLEHLVKTDQLTELFSRAYLDEKIQYSMKIHQK    450
                     .||.|:||||:|.||||||::||:||:||||:||::|||||.||||:.:.
BL00435___ytr    392 TLIRHSTLAVSNLMLRDRLKYLVQTDRLTELYSRSHLDEKIGYSMKLDES    441

BSNT_04317___    451 GVFILVDIDNFKNVNDTYGHQTGDEILIQVASVIKSNIRKHDVGARWGGE    500
                     ||.:|:|||:||.:|||||||.||:||||||.||:.|||..||.||||||
BL00435___ytr    442 GVLVLIDIDDFKQINDTYGHQKGDDILIQVARVIQRNIRDQDVAARWGGE    491

BSNT_04317___    501 ELAIYLPNVPVAVGKRITERLVYAVRKNTKPEVTISCGISCWTTETKKSL    550
                     |||:|||...:..|:.:.|||:..||:.|.|.||||||:|.|:.:..|||
BL00435___ytr    492 ELAVYLPKARLNAGEMLAERLIMLVRECTDPTVTISCGVSHWSQDRPKSL    541

BSNT_04317___    551 KELVHEADEALYSAKRSGKNRLMIHDSIK    579
                     .:|..|||.|||:|||:|||:.|.|    
BL00435___ytr    542 SDLFKEADVALYNAKRNGKNKFMTH----    566


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04317 and BL00435

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
