Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04299 and BL00425

See DNA alignment / Visit BSNT_04299 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence pep-align/BSNT_04299___sppA.1.5803.seq
#    -bsequence pep-align/BL00425___sppA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04299___sppA-BL00425___sppA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04299___sppA-BL00425___sppA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04299___sppA
# 2: BL00425___sppA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     238/335 (71.0%)
# Similarity:   286/335 (85.4%)
# Gaps:           0/335 ( 0.0%)
# Score: 1231.0
# 
#
#=======================================

BSNT_04299___      1 MNAKRWIALVIALGIFGVSIIVSISMSFFESVKGAQTDLTSLTDESQEKT     50
                     ||||||||||||||:|.:|.::|:.::.|:::.........|.|..:|..
BL00425___spp      1 MNAKRWIALVIALGVFALSAVMSLLLAVFDTMGNDGKMQFGLNDTQEETV     50

BSNT_04299___     51 LENGSLSSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDK    100
                     ||.|:.|.|||||||:|||.|||.:|.|..::|||||:||:.||:||||.
BL00425___spp     51 LEQGNSSRKIAVLEVNGTISDNGGASGLFSSEGYNHRSFLQMLEKAKDDS    100

BSNT_04299___    101 TVKGIVLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAASGGY    150
                     .||||||:|||||||||||||||||||||||:||||||||||||||||||
BL00425___spp    101 AVKGIVLRVNSPGGGVYESAEIHKKLEEIKKDTKKPIYVSMGSMAASGGY    150

BSNT_04299___    151 YISAAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHKD    200
                     |||..||||||.|:||||||||||||:||||||:|||:..||||||..||
BL00425___spp    151 YISTPADKIFAAPDTLTGSLGVIMESLNYSKLAEKLGLKTETIKSGEFKD    200

BSNT_04299___    201 IMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRSMSKAEVKKIADGRV    250
                     ||||:|:|||:|:.|||||||::||||||||::||.||:.:|||||||||
BL00425___spp    201 IMSPTRDMTKKEREIMQSMVDDAYEGFVDVIAEGRGMSENDVKKIADGRV    250

BSNT_04299___    251 YDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKNASVISYEESFGLGSLF    300
                     |||||||:.:|:||||:|:|.:.|||||||:|..|||:|||||.||.|||
BL00425___spp    251 YDGRQAKQNHLIDELGYYEDAVKAMKKDHKNLAGASVVSYEESAGLASLF    300

BSNT_04299___    301 SMGANKMFKSEIDFLNMREILSQSGSPRMMYLYAK    335
                     ||.||||||||.||||::|.:||||:||:||||||
BL00425___spp    301 SMTANKMFKSEADFLNIKEAISQSGAPRLMYLYAK    335


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