Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04297 and BL00423
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence pep-align/BSNT_04297___ytfI.1.5803.seq
# -bsequence pep-align/BL00423___ytfI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04297___ytfI-BL00423___ytfI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04297___ytfI-BL00423___ytfI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04297___ytfI
# 2: BL00423___ytfI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 104/239 (43.5%)
# Similarity: 153/239 (64.0%)
# Gaps: 17/239 ( 7.1%)
# Score: 526.5
#
#
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BSNT_04297___ 1 MLLEEVKNMVYV-LTAILILIGIVLLLRMKIHVALEYLHADDNDKLTLKI 49
|:|: :..:.||:..::: |||.||:||||.||:|:||:|:
BL00423___ytf 1 --------MIYIWIAGVFILLAALMI--MKIRVAIEYLHTDDDDRLTVKV 40
BSNT_04297___ 50 TALFGLIRIKKTIPAIKVNKEDGTVDIKQKTESKMKKSSGKKKITQNDVQ 99
...||::|||:.||.||:|:||.|||:|::|.|.:||...::||...:|.
BL00423___ytf 41 RTAFGILRIKREIPVIKINQEDMTVDVKEQTNSALKKDKKRRKIGYREVF 90
BSNT_04297___ 100 QSINKIEMLLHQVTRLRKISASFLAHLHITKLEWVTVIGIQDAAVTGVLT 149
.|..:|:.|:.|:..::.|...|:..:|:|||||.:|:|..|||:||::|
BL00423___ytf 91 DSTKQIKKLVEQIINMQPIIRRFMKRIHVTKLEWTSVLGFPDAALTGIVT 140
BSNT_04297___ 150 GAVWGVKGGIAAMLYDHLDFVNKPVYEVIPSFQVPVSKTHFQCIFFFRFG 199
|..|.:|.|..|:|:....|.::|.|||||:|....||||..|||.||.|
BL00423___ytf 141 GGAWSLKAGTVALLHQLFCFDSQPEYEVIPAFNSRSSKTHLTCIFHFRVG 190
BSNT_04297___ 200 HAMLAAFKFVKYG----RELSVLKKNPSARMTSKNDSSV 234
||:.|||:.|... |.|..|.||.|. ::||||||
BL00423___ytf 191 HAITAAFRIVVNWKGKMRGLFKLPKNLSG--STKNDSSV 227
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