Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04297 and BL00423
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence dna-align/BSNT_04297___ytfI.1.5803.seq
# -bsequence dna-align/BL00423___ytfI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04297___ytfI-BL00423___ytfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04297___ytfI-BL00423___ytfI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04297___ytfI
# 2: BL00423___ytfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity: 436/786 (55.5%)
# Similarity: 436/786 (55.5%)
# Gaps: 183/786 (23.3%)
# Score: 1068.5
#
#
#=======================================
BSNT_04297___ 1 ATGCTCCTAGAGGAAGTGAAGA-----ATATGGTGTAT-------GTACT 38
|.|| |||||| || |||.|
BL00423___ytf 1 ------------------ATGATTTACATATGG---ATTGCGGGAGTATT 29
BSNT_04297___ 39 GACAGCCATTCTTATTCTCATAGGGATCGTACTGCTTCTCAGAATGAAAA 88
||||||| |.||.|.|.| |..|.|.||||||||
BL00423___ytf 30 ------CATTCTT-------TTGGCAGCAT-----TGATGATAATGAAAA 61
BSNT_04297___ 89 TCCATGTCGCGCTGGAGTATCTTCATGCCGATGATAATGACAAATTGACC 138
|||..||.|||.|.||||||||||||.|.||.|||.|.|||....|||||
BL00423___ytf 62 TCCGCGTAGCGATCGAGTATCTTCATACAGACGATGACGACCGGCTGACC 111
BSNT_04297___ 139 TTGAAGATT---ACGGCGCTGTTTGGCCTTATAAGGATCAAAAAAACAAT 185
.|.||..|| ||||| .||||||.||.|..|.||.||||.....||
BL00423___ytf 112 GTCAAAGTTCGGACGGC---TTTTGGCATTCTGCGCATTAAAAGGGAGAT 158
BSNT_04297___ 186 CCCGGCGATTAAGGTGAACAAAGAAGACGGA----ACAGTGGATATCAAA 231
.||||.||||||..|.|||.|.|| ||| ||.||.|||.|.|||
BL00423___ytf 159 TCCGGTGATTAAAATCAACCAGGA----GGATATGACCGTTGATGTGAAA 204
BSNT_04297___ 232 CAAAAAACTGAATCC--------AAAATGAAAAAAAGCAGCGGAAAGAAA 273
.||.|.|| ||||.| ||||.||.|||||| |.||.|
BL00423___ytf 205 GAACAGAC-GAATTCGGCTCTGAAAAAAGATAAAAAG-------AGGAGA 246
BSNT_04297___ 274 AAAAT----TACACAAAA-----CGATGTGCAG--CAAAGCATTAATAAA 312
||||| ||.....|| |||| || |.||||| |||.||
BL00423___ytf 247 AAAATCGGCTATCGGGAAGTGTTCGAT----AGTACGAAGCA--AATCAA 290
BSNT_04297___ 313 ATCGAAATGCTTTTGCATCAGGTCACCAGACTA-----CGGAAAATCAGC 357
| |||| |..||.|.|||.|||.| |.|| |.||..|||.||
BL00423___ytf 291 A---AAAT--TGGTGGAACAGATCATC--AATATGCAGCCGATCATCCGC 333
BSNT_04297___ 358 GCGTCTTTTCTCGCGCATTTACATATCACAAAACTAGAATGGGTTACAGT 407
||..||.|...|||.||| ||..||||.||.||.||||||....|.||
BL00423___ytf 334 -CGGTTTATGAAGCGGATT--CACGTCACGAAGCTCGAATGGACCTCTGT 380
BSNT_04297___ 408 AATCGGAATTCAGGACGCGGCAGTGACAGGTGTGTTAACAGGTGCTGTAT 457
..||||..|||..||||||||..|.||.||..|..|.|||||.|..|..|
BL00423___ytf 381 CCTCGGCTTTCCTGACGCGGCTTTAACCGGGATTGTCACAGGCGGCGCCT 430
BSNT_04297___ 458 GGGGTGTGAAGGGCGGTATCGCAGCAATGCTCTACGACCACCTGGA---- 503
||....||||.|.|||.| ||..| ||||| |.||.|
BL00423___ytf 431 GGTCCCTGAAAGCCGGCA-CGGTG----GCTCT-------CTTGCATCAG 468
BSNT_04297___ 504 --------CTTTGTGAATAAACCTGTCTATGAGGTGATCCCGTCGTTTCA 545
|||||..|...|.||.|..||.||||||||.||..|.|||.|
BL00423___ytf 469 CTTTTTTGCTTTGACAGCCAGCCGGAATACGAGGTGATTCCAGCCTTTAA 518
BSNT_04297___ 546 -AGTCCCTGTT--TCCAAGACCCAT-TTTCAGTGTATATTCTTTTTTCGC 591
|| |.||| |||||.||.||| |..|| |||||||||..||||||.
BL00423___ytf 519 CAG---CCGTTCCTCCAAAACGCATCTGACA-TGTATATTCCATTTTCGG 564
BSNT_04297___ 592 TTTGGACATGCTATGCTTGCAGCTTTCAAATTCGT--------------- 626
.|||||||||||||....||||||||||.|.||||
BL00423___ytf 565 GTTGGACATGCTATAACCGCAGCTTTCAGAATCGTGGTGAACTGGAAAGG 614
BSNT_04297___ 627 -CAAATACGGACGGGAGCTATCCGTATTAAAG------AAGAATCCGTCG 669
.||||.|| ||| |.||||.||| ||.||||.|||.
BL00423___ytf 615 GAAAATGCG--CGG--------CTTATTTAAGCTGCCAAAAAATCTGTCA 654
BSNT_04297___ 670 GCTAGAATGACTTCAAAGAATGATTCATCAGTTTAA 705
|.|..|| |||||||||||||||||||.||.
BL00423___ytf 655 GGTTCAA------CAAAGAATGATTCATCAGTATAG 684
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