Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04296 and BL00422

See DNA alignment / Visit BSNT_04296 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence pep-align/BSNT_04296___ytfJ.1.5803.seq
#    -bsequence pep-align/BL00422___ytfJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04296___ytfJ-BL00422___ytfJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04296___ytfJ-BL00422___ytfJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04296___ytfJ
# 2: BL00422___ytfJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:     121/155 (78.1%)
# Similarity:   135/155 (87.1%)
# Gaps:           7/155 ( 4.5%)
# Score: 605.5
# 
#
#=======================================

BSNT_04296___      1 MADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFA     50
                     ||:||||||||||||||||||||||||||||||||||||||||:||||||
BL00422___ytf      1 MAEHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSRVGFGFA     50

BSNT_04296___     51 AGGSEFGG-KPAEKKSEDD--ETREQKLPFGGGSGGGVSITPIAFLIVGS     97
                     |||||||| ||||.|:.|.  |.:|.||||||||||||||||||||||||
BL00422___ytf     51 AGGSEFGGNKPAESKASDGDRERKESKLPFGGGSGGGVSITPIAFLIVGS    100

BSNT_04296___     98 TGIRMLHLDENTHLIEKILDAAPQTLERIQQMFKKNNKNQGQGQNQNQMN    147
                     :|:::||||||||:|:||||:||||:||||.|||||:|   |.||.|:.|
BL00422___ytf    101 SGVKVLHLDENTHVIDKILDSAPQTIERIQHMFKKNDK---QKQNMNRQN    147

BSNT_04296___    148 NMNY-    151
                     .... 
BL00422___ytf    148 QTPPF    152


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