Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04296 and BL00422
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence dna-align/BSNT_04296___ytfJ.1.5803.seq
# -bsequence dna-align/BL00422___ytfJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04296___ytfJ-BL00422___ytfJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04296___ytfJ-BL00422___ytfJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04296___ytfJ
# 2: BL00422___ytfJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 485
# Identity: 347/485 (71.5%)
# Similarity: 347/485 (71.5%)
# Gaps: 55/485 (11.3%)
# Score: 1271.0
#
#
#=======================================
BSNT_04296___ 1 ATGGCAGACCATCCCATCCAAGGTTTAATGAAAACCGCAATGGAAAACTT 50
|||||.||.|||||.||.||||||||.|||||||||||||||||||||||
BL00422___ytf 1 ATGGCTGAACATCCAATTCAAGGTTTGATGAAAACCGCAATGGAAAACTT 50
BSNT_04296___ 51 GAAGGAAATGATTGATGTTAACACCATCATCGGAGATCCAGTAGAAACGC 100
.||.||||||||||||||.||.|||||.|||||||||||.||.|||||.|
BL00422___ytf 51 AAAAGAAATGATTGATGTCAATACCATTATCGGAGATCCTGTGGAAACAC 100
BSNT_04296___ 101 CTGATGGAAGTGTGATTTTAACTGTTTCTAAAGTTGGATTTGGATTCGCC 150
||||.||.||.||.||..||||.||.||.|.|||.|||||.||.||.||.
BL00422___ytf 101 CTGACGGCAGCGTCATCCTAACCGTCTCCAGAGTGGGATTCGGCTTTGCG 150
BSNT_04296___ 151 GCAGGCGGAAGCGAGTTTGGCGG----AAAGCCGGCCGAAAAGAAATCGG 196
||.||||||||||||||.||||| ||| |||||||||...|||.||
BL00422___ytf 151 GCTGGCGGAAGCGAGTTCGGCGGCAATAAA-CCGGCCGAATCCAAAGCG- 198
BSNT_04296___ 197 AAGACGAT-GAGAC--------AAGAGAACAGAAACTTCCTTTCGGAGGC 237
|| |||| ||||| ||.||||..|||.||.||.||.||.||.
BL00422___ytf 199 -AG-CGATGGAGACCGCGAACGAAAAGAATCGAAGCTCCCGTTTGGCGGG 246
BSNT_04296___ 238 GGAAGCGGGGGCGGTGTGTCCATTACGCCGATCGCGTTTTTAATTGTCGG 287
||||||||.||.||.||.||.|||||||||||.||.|||||.||||||||
BL00422___ytf 247 GGAAGCGGAGGAGGCGTATCGATTACGCCGATTGCTTTTTTGATTGTCGG 296
BSNT_04296___ 288 ATCGACAGGCATCAGAATGCTTCATTTAGATGAAAATACCCATTTAATAG 337
|||..|||||.|.|.|.|.||.|||||.||||||||.||.||..|.||.|
BL00422___ytf 297 ATCATCAGGCGTTAAAGTACTGCATTTGGATGAAAACACGCACGTCATCG 346
BSNT_04296___ 338 AGAAAATTTTAGACGCAGCCCCTCAAACACTCGAACGCATCCAGCAAATG 387
|.||.|||||||||.||||.||.|||||..|||||||.||.|||||.|||
BL00422___ytf 347 ATAAGATTTTAGACTCAGCTCCGCAAACGATCGAACGGATTCAGCATATG 396
BSNT_04296___ 388 TTCAAGAAAA---ATAACAAGAACCAAGGCCAGGGCCAAAA-------TC 427
||.||||||| ||||..||||.||| ||.| ||
BL00422___ytf 397 TTTAAGAAAAACGATAAGCAGAAGCAA----------AATATGAACCGTC 436
BSNT_04296___ 428 AAAACCAAATGAACAATATGA------ATTATTAA 456
||||||| || .||.||||
BL00422___ytf 437 AAAACCA------------GACGCCTCCTTTTTAA 459
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