Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04250 and BL00396

See DNA alignment / Visit BSNT_04250 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence pep-align/BSNT_04250___phoP.1.5803.seq
#    -bsequence pep-align/BL00396___phoP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04250___phoP-BL00396___phoP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04250___phoP-BL00396___phoP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04250___phoP
# 2: BL00396___phoP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     192/240 (80.0%)
# Similarity:   216/240 (90.0%)
# Gaps:           0/240 ( 0.0%)
# Score: 1003.0
# 
#
#=======================================

BSNT_04250___      1 MNKKILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKPDLI     50
                     |:||||||||||||||||:||||||||.|:||.|||..|.||..||||||
BL00396___pho      1 MSKKILVVDDEESIVTLLKYNLERSGYHVVTAMDGEAGLLKAIEEKPDLI     50

BSNT_04250___     51 VLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDY    100
                     |||:||||:|||||||:|||:|||:|||||||||:|||||||||||||||
BL00396___pho     51 VLDLMLPKMDGIEVCKELRQKKLMYPILMLTAKDDEFDKVLGLELGADDY    100

BSNT_04250___    101 MTKPFSPREVNARVKAILRRSEIAAPSSEMKNDEMEGQIVIGDLKILPDH    150
                     ||||||||||.|||||||||::..:...|...:...|:::||:|||||:|
BL00396___pho    101 MTKPFSPREVTARVKAILRRTQTLSVQPEETEEPDAGELIIGELKILPEH    150

BSNT_04250___    151 YEAYFKESQLELTPKEFELLLYLGRHKGRVLTRDLLLSAVWNYDFAGDTR    200
                     ||.||:..:||||||||||||||||||||||||||||:||||||||||||
BL00396___pho    151 YEVYFQNERLELTPKEFELLLYLGRHKGRVLTRDLLLNAVWNYDFAGDTR    200

BSNT_04250___    201 IVDVHISHLRDKIENNTKKPIYIKTIRGLGYKLEEPKMNE    240
                     ||||||||||||||.|||||.|||||||||||:||||:|:
BL00396___pho    201 IVDVHISHLRDKIEKNTKKPEYIKTIRGLGYKMEEPKLND    240


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