Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04247 and BL00394

See DNA alignment / Visit BSNT_04247 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:21
# Commandline: needle
#    -asequence pep-align/BSNT_04247___polA.1.5803.seq
#    -bsequence pep-align/BL00394___polA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04247___polA-BL00394___polA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04247___polA-BL00394___polA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04247___polA
# 2: BL00394___polA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 880
# Identity:     736/880 (83.6%)
# Similarity:   817/880 (92.8%)
# Gaps:           1/880 ( 0.1%)
# Score: 3802.0
# 
#
#=======================================

BSNT_04247___      1 MTERKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLED     50
                     ||||||||||||||||||||||||||||:||:||||||||..|||||||:
BL00394___pol      1 MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFTTILMKMLEE     50

BSNT_04247___     51 EKPTHMLVAFDAGKTTFRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAY    100
                     |||||||||||||||||||.|||||||||||||||||||:||||||||||
BL00394___pol     51 EKPTHMLVAFDAGKTTFRHKTFKEYKGGRQKTPPELSEQLPFIRELLDAY    100

BSNT_04247___    101 QISRYELEQYEADDIIGTLAKSAEKDGFEVKVFSGDKDLTQLATDKTTVA    150
                     :|||||||.||||||||||||||||||||||:||||||||||||:.||||
BL00394___pol    101 RISRYELENYEADDIIGTLAKSAEKDGFEVKIFSGDKDLTQLATEGTTVA    150

BSNT_04247___    151 ITRKGITDVEFYTPEHVKEKYGLTPEQIIDMKGLMGDSSDNIPGVPGVGE    200
                     ||:|||||||:||||||:||||||||||||||||||||||||||||||||
BL00394___pol    151 ITKKGITDVEYYTPEHVREKYGLTPEQIIDMKGLMGDSSDNIPGVPGVGE    200

BSNT_04247___    201 KTAIKLLKQFDSVEKLLESIDEVSGKKLKEKLEEFKDQALMSKELATIMT    250
                     ||||||||||.:||:||.||||||||||||||||||:|||||||||||.|
BL00394___pol    201 KTAIKLLKQFHTVEELLSSIDEVSGKKLKEKLEEFKEQALMSKELATITT    250

BSNT_04247___    251 DAPIEVSVSALEYQGFNREQVIAIFKDLGFNTLLERLGEDSAEAEQDQSL    300
                     :||:|||:.:|.|:||:||.|:.|||||||::||||:||::.|.|::| |
BL00394___pol    251 EAPLEVSLDSLGYEGFDREAVVKIFKDLGFHSLLERIGEEAGEKEEEQ-L    299

BSNT_04247___    301 EDINVKTVTDVTSDILVSPSAFVVEQIGDNYHEEPILGFSIVNETGAYFI    350
                     |:|:|...||:|.|:..||::.||||:||||||.||||||||||.||:||
BL00394___pol    300 EEIDVMIKTDITDDLFASPASLVVEQLGDNYHEAPILGFSIVNEHGAFFI    349

BSNT_04247___    351 PKDTAVESEVFKEWVENDDQKKWVFDSKRAVVALRWQGIELKGAEFDTLL    400
                     |::|||:|:.||||.|::.:||||||:|||.|||||:||||||||||.||
BL00394___pol    350 PEETAVQSDCFKEWAEDESKKKWVFDAKRAAVALRWRGIELKGAEFDVLL    399

BSNT_04247___    401 AAYIINPGNSYDDVASVAKDYGLHIVSSDESVYGKGAKRAVPSEDVLSEH    450
                     ||||||||:||||||||||::.|||||:||:|||||||:|||.|..|::|
BL00394___pol    400 AAYIINPGHSYDDVASVAKEHQLHIVSADEAVYGKGAKQAVPDEKELADH    449

BSNT_04247___    451 LGRKALAIQSLREKLVQELENNDQLELFEELEMPLALILGEMESTGVKVD    500
                     |.|||.||..|||||:.|||.|:||||||.||||||.|||||||.||:||
BL00394___pol    450 LARKAKAISLLREKLLDELEENEQLELFEALEMPLAHILGEMESIGVQVD    499

BSNT_04247___    501 VDRLKRMGEELGAKLKEYEEKIHEIAGEPFNINSPKQLGVILFEKIGLPV    550
                     |||||:|||||.|||.|||:||||.|||.||||||||||||||:|:||||
BL00394___pol    500 VDRLKKMGEELSAKLAEYEKKIHESAGETFNINSPKQLGVILFDKLGLPV    549

BSNT_04247___    551 VKKTKTGYSTSADVLEKLADKHDIVDYILQYRQIGKLQSTYIEGLLKVTR    600
                     ||||||||||||||||||.|||.|::.||.|||||||||||:||||||.:
BL00394___pol    550 VKKTKTGYSTSADVLEKLRDKHVIIEDILHYRQIGKLQSTYVEGLLKVIK    599

BSNT_04247___    601 PDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEKD    650
                     .||||||||||||||||||||||||||||||||||||||||||||||:|.
BL00394___pol    600 KDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSQKG    649

BSNT_04247___    651 WLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVAKDE    700
                     ||||||||||||||||||||||:|||||||||||:|||||||||||:::|
BL00394___pol    650 WLIFAADYSQIELRVLAHISKDKNLIEAFTNDMDVHTKTAMDVFHVSEEE    699

BSNT_04247___    701 VTSAMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAGAFIDRYLESFQGV    750
                     ||.|||||||||||||||||||||||||||||||||.|||:||..|||||
BL00394___pol    700 VTPAMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAAAFIERYFHSFQGV    749

BSNT_04247___    751 KAYMEDSVQEAKQKGYVTTLMHRRRYIPELTSRNFNIRSFAERTAMNTPI    800
                     |.|||::||||||:||||||:.||||||||||||||:|||||||||||||
BL00394___pol    750 KEYMEETVQEAKQRGYVTTLLSRRRYIPELTSRNFNLRSFAERTAMNTPI    799

BSNT_04247___    801 QGSAADIIKKAMIDMAAKLKEKQLKARLLLQVHDELIFEAPKEEIEILEK    850
                     ||||||||||||||||.|||||.|:|:||||||||||||||::||::|||
BL00394___pol    800 QGSAADIIKKAMIDMADKLKEKNLQAKLLLQVHDELIFEAPEDEIKVLEK    849

BSNT_04247___    851 LVPEVMEHALALDVPLKVDFASGPSWYDAK    880
                     ||||||||||.||||||||.||||||||||
BL00394___pol    850 LVPEVMEHALELDVPLKVDCASGPSWYDAK    879


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04247 and BL00394

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
