Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04238 and BL00390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence pep-align/BSNT_04238___gapB.1.5803.seq
# -bsequence pep-align/BL00390___gapB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04238___gapB-BL00390___gapB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04238___gapB-BL00390___gapB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04238___gapB
# 2: BL00390___gapB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 277/340 (81.5%)
# Similarity: 307/340 (90.3%)
# Gaps: 0/340 ( 0.0%)
# Score: 1461.0
#
#
#=======================================
BSNT_04238___ 1 MKVKVAINGFGRIGRMVFRKAMLDDQIQVVAINASYSAETLAHLIKYDTI 50
||||||||||||||||||||||||:||.:.||||||..|||||||||||.
BL00390___gap 1 MKVKVAINGFGRIGRMVFRKAMLDEQIDIAAINASYPPETLAHLIKYDTN 50
BSNT_04238___ 51 HGRYDKEVVAGEDSLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKF 100
||||:.:|.||||.|.||||||:|.|.||||.|||.:|.|||.|||||||
BL00390___gap 51 HGRYELDVKAGEDCLFVNGKKVMLTNQRDPKLLPWAQYGIDIAVEATGKF 100
BSNT_04238___ 101 NAKDKAMGHIEAGAKKVILTAPGKNEDVTIVMGVNEDQFDAERHVIISNA 150
|:|:||..|||||||||||||||||||:||||||||..||||||.|||||
BL00390___gap 101 NSKEKAEAHIEAGAKKVILTAPGKNEDITIVMGVNERDFDAERHTIISNA 150
BSNT_04238___ 151 SCTTNCLAPVVKVLDEEFGIESGLMTTVHAYTNDQKNIDNPHKDLRRARA 200
||||||||||.||||:.||||:||:|||||:|||||||||||||||||||
BL00390___gap 151 SCTTNCLAPVAKVLDDAFGIENGLVTTVHAFTNDQKNIDNPHKDLRRARA 200
BSNT_04238___ 201 CGESIIPTTTGAAKALSLVLPHLKGKLHGLALRVPVPNVSLVDLVVDLKT 250
||.||||||||||||||||:|||||::|||||||||.||||||||.|||:
BL00390___gap 201 CGSSIIPTTTGAAKALSLVMPHLKGRMHGLALRVPVSNVSLVDLVADLKS 250
BSNT_04238___ 251 DVTAEEVNEAFKRAAKTSMYGVLDYSDEPLVSTDYNTNPHSAVIDGLTTM 300
|||||::||||:.||..||.|::|..||||||:|:||||:|||||.|:||
BL00390___gap 251 DVTAEDINEAFRMAAAGSMSGIIDVCDEPLVSSDFNTNPYSAVIDSLSTM 300
BSNT_04238___ 301 VMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMKHPSAV 340
|:|:||||||||||||||||||||||||:.|:||||||||
BL00390___gap 301 VLENRKVKVLAWYDNEWGYSCRVVDLIRYAASRMKHPSAV 340
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