Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04234 and BL00386
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:19
# Commandline: needle
# -asequence pep-align/BSNT_04234___dnaB.1.5803.seq
# -bsequence pep-align/BL00386___dnaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04234___dnaB-BL00386___dnaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04234___dnaB-BL00386___dnaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04234___dnaB
# 2: BL00386___dnaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 478
# Identity: 325/478 (68.0%)
# Similarity: 395/478 (82.6%)
# Gaps: 10/478 ( 2.1%)
# Score: 1699.5
#
#
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BSNT_04234___ 1 MADYWKDVLPVDPYVVKSRSMLQDIDRQIITQLYQPLIGPVAFSLYMTLW 50
|::||||:||||||||||..:|||:||||:|.|||||||..:|||::|||
BL00386___dna 1 MSNYWKDLLPVDPYVVKSSGLLQDLDRQIVTLLYQPLIGSFSFSLFLTLW 50
BSNT_04234___ 51 GELEQNRLWGGESTHRQLMGMTQSNLKTIHQEQGKLEGIGLLKVYMKESE 100
|||||||:||..|||||||...|::|||||.|:.|||||||||.|:||:|
BL00386___dna 51 GELEQNRVWGKSSTHRQLMAAMQTSLKTIHSEKEKLEGIGLLKTYIKETE 100
BSNT_04234___ 101 RQERLFIYELLPPLRPNEFFEDGMLNVFLYNRVGKTKYQQLKQFFTHPAI 150
.||||||||:|||||:|||:||||||||||||||.::||||::|:||::
BL00386___dna 101 -HERLFIYELIPPLRPDEFFQDGMLNVFLYNRVGKARFQQLKEYFSHPSV 149
BSNT_04234___ 151 SEDAKDITRPFNHAFESLQPSEWKLTSDMEETVRLAEGTEYTSVGQSPSY 200
.|:|:||||.||..|.|:||||||::.||.|.:.|.|..|:...|.|...
BL00386___dna 150 PEEARDITRSFNEVFASVQPSEWKMSDDMIEAMELREDHEWMKEGNSQPA 199
BSNT_04234___ 201 TITEDVFDFDLFLAGLSETMIPRKAMTQQVRDTIKKLSYLYGIDPLQMQN 250
.:|:..|||.|||||||:|:|||||:|.||::|||||::||||:||||||
BL00386___dna 200 AVTDGAFDFQLFLAGLSDTLIPRKALTDQVKETIKKLAFLYGIEPLQMQN 249
BSNT_04234___ 251 VVMSAIDERDVITTEALRKAASDWYQIERNGQLPDLVEKTQPVHLREGEK 300
|||||:||.|:||||||||||||||||||.|.||:||:|.||::|| |:
BL00386___dna 250 VVMSAVDEHDMITTEALRKAASDWYQIERGGPLPELVDKVQPMNLR--EQ 297
BSNT_04234___ 301 PAEDDSLDGK---LIALLEAISPKKLLQDIADGTEPSKADLKIIEEIMFE 347
|.:..|.:.| ||||||.:||:||||||..|.||||||||||||||.:
BL00386___dna 298 PNQQSSTNAKEDNLIALLEQVSPRKLLQDIGGGAEPSKADLKIIEEIMLD 347
BSNT_04234___ 348 QKLEPGVTNVLIYYVMLKTDMKLSKNYIQKIASHWARKKVKTVREAMKLA 397
|||||||.|||||||||||||||||||.||||||||||||:|||||||||
BL00386___dna 348 QKLEPGVINVLIYYVMLKTDMKLSKNYTQKIASHWARKKVRTVREAMKLA 397
BSNT_04234___ 398 IEENRQYLEWAEGKTKSSKRNQKVIREEKLPDWMTEKETASDSESGQQKL 447
.|||||||||||||.|:| ||:|||||||||||:.|.:.|.......::.
BL00386___dna 398 KEENRQYLEWAEGKKKTS-RNKKVIREEKLPDWLRESDDADSKPLETEQA 446
BSNT_04234___ 448 HP---QDLEEQKKKMMEEMQKLKKYSAY 472
.| :..::||:|::||::|||.:||.
BL00386___dna 447 GPATREGFDQQKQKLLEEVKKLKNHSAL 474
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