Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04229 and BL00384
See
DNA alignment /
Visit
BSNT_04229 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:19
# Commandline: needle
# -asequence pep-align/BSNT_04229___ytxB.1.5803.seq
# -bsequence pep-align/BL00384___ytxB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04229___ytxB-BL00384___ytxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04229___ytxB-BL00384___ytxB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04229___ytxB
# 2: BL00384___ytxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 105/219 (47.9%)
# Similarity: 151/219 (68.9%)
# Gaps: 15/219 ( 6.8%)
# Score: 525.0
#
#
#=======================================
BSNT_04229___ 1 MKRKTAVKW--LAVLAGAGLLYWGNKTYLNVSPKEIRVWVLSFGVFAPLM 48
|:::|..|| :||:|.||| |.|..|||:||..||..|||||:||||:
BL00384___ytx 1 MRKRTLAKWTVIAVIAAAGL--WLNAKYLNLSPAHIREGVLSFGIFAPLI 48
BSNT_04229___ 49 FIGISIVRPLVLFPVSVISIAGGLAFGPLLGTLYTLFGSMCASAVSFFAA 98
:||:.::||.:|.|.||.:::||||||||.|:||:..|:...:.:||..|
BL00384___ytx 49 YIGLLMIRPFLLLPASVFAVSGGLAFGPLFGSLYSFIGAAGGAFLSFALA 98
BSNT_04229___ 99 GLFSAKKNGHYE----RLEAIQKQMEDNGFFYIFLLRILPINFDFVSYAA 144
.:..|::: :|::::..:..||||.|.|||:.||:||.|||||
BL00384___ytx 99 ----YRLGGYFQHMPLKLDSLRTLLRKNGFFCILLLRLAPIHFDAVSYAA 144
BSNT_04229___ 145 GLSNVKALPYFAATAVGIIPGTIALNVLGASFLAGNLPAFFMVLALYIVF 194
|:|.||.|.:..|||.|||||||.|||||:|.|.|::.|..:..|:|::|
BL00384___ytx 145 GVSKVKPLSFALATAAGIIPGTIILNVLGSSLLTGDILAIAVTAAIYLIF 194
BSNT_04229___ 195 ISLPFIFRKKMQNLFQESN 213
|::|.:||||:|.|..
BL00384___ytx 195 ITVPLLFRKKVQALLD--- 210
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.