Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04220 and BL00380

See DNA alignment / Visit BSNT_04220 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence pep-align/BSNT_04220___lytS.1.5803.seq
#    -bsequence pep-align/BL00380___lytS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04220___lytS-BL00380___lytS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04220___lytS-BL00380___lytS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04220___lytS
# 2: BL00380___lytS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     444/594 (74.7%)
# Similarity:   519/594 (87.4%)
# Gaps:           1/594 ( 0.2%)
# Score: 2301.0
# 
#
#=======================================

BSNT_04220___      1 MIHLMIMMLERVGIIVILGFILAHTKLFRQALQNQDGYKGKAILISIFSL     50
                     |:.|||||||||||||||||:|||.|:|||.||:.:|||||.:||.||||
BL00380___lyt      1 MVQLMIMMLERVGIIVILGFMLAHMKVFRQHLQHPEGYKGKGVLIFIFSL     50

BSNT_04220___     51 FSIISNYTGIEIQRNMIVNNDWVFTIDPSGSIANTRILGVEIGGLLGGPF    100
                     ||||||||||||:...|:||||:|.||||.|||||||||||||||:||||
BL00380___lyt     51 FSIISNYTGIEIREREILNNDWIFAIDPSSSIANTRILGVEIGGLIGGPF    100

BSNT_04220___    101 VGAGIGILAGLHRFSLGGSTALSCAVSSILAGVLAGLIGRYFTKRYRMPT    150
                     ||||:|:|:|:|||||||:|||||||||:||||:||.||.:|..|::|.|
BL00380___lyt    101 VGAGVGLLSGIHRFSLGGTTALSCAVSSLLAGVIAGYIGSFFRNRHQMVT    150

BSNT_04220___    151 PRIAALVGIGMESLQMIIILLMAKPFSDAWELVSMIGIPMILINGTGSFI    200
                     ||:|||.||.||.|||::||::|||.::|..||.||||||:::|||||||
BL00380___lyt    151 PRVAALAGICMEGLQMLMILVLAKPQAEALALVQMIGIPMMIVNGTGSFI    200

BSNT_04220___    201 FLSIIQAIIRKEEQARALETHRVLTIADQTLPFFRQGLNENSCKSVAAII    250
                     ||||||:||||||||||::||:|.:||||||||||:||||:||||.|.||
BL00380___lyt    201 FLSIIQSIIRKEEQARAVQTHKVFSIADQTLPFFRRGLNEDSCKSAALII    250

BSNT_04220___    251 HKLTGTDAVSLTDKEKILAHVGAGMDHHIPSKSLITGLSKKVIKTGHIMK    300
                     |::|||||||:||:|.||||||.|.|||||||:||||||||||:||.:||
BL00380___lyt    251 HRMTGTDAVSITDRENILAHVGDGADHHIPSKNLITGLSKKVIQTGKVMK    300

BSNT_04220___    301 AISQEEIECTHAECPLHAAIVLPLTSNGNTIGTLKMYFKSPAGLSQVEEE    350
                     ..|::||||.|..|||.|||||||.||..||||||:|||.|:||::|.||
BL00380___lyt    301 VKSRDEIECAHRSCPLQAAIVLPLFSNRETIGTLKLYFKHPSGLNRVTEE    350

BSNT_04220___    351 LAEGLAMLFSTQLELGEAELQSKLLKDAEIKALQAQVNPHFLFNAINTIS    400
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
BL00380___lyt    351 LAEGLAMLFSTQLELGEAELQSKLLKDAEIKALQAQVNPHFLFNAIHTIS    400

BSNT_04220___    401 ALCRTDVEKTRKLLLQLSVYFRSNLQGARQLLIPLSKELNHLNAYLSLEQ    450
                     ||||||.||||||||||||||||||||||||:||||||||||.|||||||
BL00380___lyt    401 ALCRTDPEKTRKLLLQLSVYFRSNLQGARQLMIPLSKELNHLEAYLSLEQ    450

BSNT_04220___    451 ARFPGKYKIELNIDSRLEQIEIPPFVLQVLVENALRHAFPKKQDMCKVTV    500
                     |||||||.|:.:|:..||.:|||||:||:|||||||||||:||.:|.|.|
BL00380___lyt    451 ARFPGKYHIDFHIEDGLENMEIPPFILQLLVENALRHAFPRKQKVCTVKV    500

BSNT_04220___    501 CVLSDDASVYMKVADNGRGIPPDVLPELGKKPFPSKEGTGTALYNLNQRL    550
                     ..:.:...|.|||:||||||.|::|.:||:.|.|||||.||||||:||||
BL00380___lyt    501 SAVRERDGVLMKVSDNGRGINPEMLGQLGQAPAPSKEGNGTALYNVNQRL    550

BSNT_04220___    551 IGLFGQQAALHISSEVHKGTEVSFQVPMQQMKEGEEHAQGVNS-    593
                     .||||.||||.|:||:.||||:||::|.|..:||...|||:|. 
BL00380___lyt    551 TGLFGHQAALQIASELDKGTEISFKIPFQTEREGNRDAQGINRG    594


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04220 and BL00380

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
