Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04219 and BL00379

See DNA alignment / Visit BSNT_04219 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence pep-align/BSNT_04219___lytT.1.5803.seq
#    -bsequence pep-align/BL00379___lytT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04219___lytT-BL00379___lytT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04219___lytT-BL00379___lytT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04219___lytT
# 2: BL00379___lytT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     167/242 (69.0%)
# Similarity:   201/242 (83.1%)
# Gaps:           3/242 ( 1.2%)
# Score: 872.5
# 
#
#=======================================

BSNT_04219___      1 MLRVLIVDDEMLARDELAYLLKRANEEMEIHEAENIESAFDQMMDQKPDL     50
                     ||:||||||||.|||||.|||::..|...|.|||:||.|||:|.|:|||:
BL00379___lyt      1 MLKVLIVDDEMFARDELRYLLEQTEEVDAIDEAEHIEEAFDKMADRKPDI     50

BSNT_04219___     51 LFLDVDLSGENGFDIAKRLKKMKHPPAVVFATAYDQYALKAFEVDALDYL    100
                     ||||:|||||||||||:|||||..|||||||||||:||||||||||:|||
BL00379___lyt     51 LFLDIDLSGENGFDIAQRLKKMSAPPAVVFATAYDEYALKAFEVDAIDYL    100

BSNT_04219___    101 TKPFDEERIQQTLKKYKKVNRDIVETEQNSHAGQHKLALSVGESIVIVDT    150
                     |||||||||:||:.|||::...  :.|:...||.|:||||:.||||::|.
BL00379___lyt    101 TKPFDEERIRQTIHKYKRMRPG--KQEERQLAGHHRLALSIDESIVVLDP    148

BSNT_04219___    151 KDIIYAGTEDGHVNVKTFDHSYTVSDTLVVIEKKLPDADFIRVHRSFVVN    200
                     .:|:|||.|.|||.|||||.:|||.|||||:|:||.....|||||||:.|
BL00379___lyt    149 DEIVYAGLEGGHVTVKTFDQAYTVHDTLVVLEQKLSQTALIRVHRSFLAN    198

BSNT_04219___    201 TEYIKEIQPWFNSTYNLIMKDGSKIPVSRTYAKELKKLLHI-    241
                     .::||:::|||||||||:|||||.|||||||||||||.||: 
BL00379___lyt    199 MDHIKQVKPWFNSTYNLLMKDGSTIPVSRTYAKELKKRLHMV    240


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