Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04219 and BL00379
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_04219___lytT.1.5803.seq
# -bsequence dna-align/BL00379___lytT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04219___lytT-BL00379___lytT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04219___lytT-BL00379___lytT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04219___lytT
# 2: BL00379___lytT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 749
# Identity: 504/749 (67.3%)
# Similarity: 504/749 (67.3%)
# Gaps: 49/749 ( 6.5%)
# Score: 1569.0
#
#
#=======================================
BSNT_04219___ 1 ATGCTCAGGGTGTTAATAGTTGATGATGAGATGCTGGCAAGAGATGAACT 50
|||||||.|||.|||||.||.||||||||.|||.|.||..|.||.||.||
BL00379___lyt 1 ATGCTCAAGGTATTAATCGTGGATGATGAAATGTTTGCGCGGGACGAGCT 50
BSNT_04219___ 51 GGCTTACTTGCTTAAGCGGGCCAATGAGGAAATGGA---AATCCATGAAG 97
|...||.||.||..|||.| |.|||.|||.|||| .||..|.||||
BL00379___lyt 51 GAGATATTTACTAGAGCAG---ACTGAAGAAGTGGATGCGATTGACGAAG 97
BSNT_04219___ 98 CGGAAAATATCGAATCCGCTTTTGACCAAATGATGGATCAAAAACCTGAT 147
|.|||.||||||||...||.||||||.|||||..|||||..|||||.|||
BL00379___lyt 98 CTGAACATATCGAAGAAGCGTTTGACAAAATGGCGGATCGCAAACCCGAT 147
BSNT_04219___ 148 TTGCTGTTTTTAGACGTTGATTTATCCGGAGAAAACGGTTTTGATATCGC 197
.|.||.||..|.|||.|.|||.|.||.||.||.|||||||||||.||.||
BL00379___lyt 148 ATCCTCTTCCTGGACATCGATCTGTCAGGGGAGAACGGTTTTGACATTGC 197
BSNT_04219___ 198 AAAGCGATTGAAGAAAATGAAGCATCCTCCTGCTGTTGTGTTTGCGACAG 247
..||||..||||.||||||..|...|||||.|||||.||.||||||||.|
BL00379___lyt 198 GCAGCGGCTGAAAAAAATGTCGGCGCCTCCGGCTGTCGTTTTTGCGACCG 247
BSNT_04219___ 248 CGTATGACCAGTATGCGCTCAAAGCGTTTGAGGTGGACGCTCTTGATTAT 297
|.|||||..|.||||||||.|||||.|||||.|||||.||..||||||||
BL00379___lyt 248 CTTATGATGAATATGCGCTGAAAGCATTTGAAGTGGATGCGATTGATTAT 297
BSNT_04219___ 298 TTAACCAAGCCTTTCGATGAAGAAAGAATTCAG-CAAACGCTGAAAAAAT 346
||.||.|||||.||.|||||.||..||| |||| ||.||..|..|.||||
BL00379___lyt 298 TTGACAAAGCCGTTTGATGAGGAGCGAA-TCAGACAGACAATCCACAAAT 346
BSNT_04219___ 347 ATAAAAAAGTCAATCGGGATATTGTAG---------AAACA----GAGCA 383
|||||| |||| | ||||| ||||
BL00379___lyt 347 ATAAAA----------GGAT------GCGCCCCGGCAAACAGGAGGAGC- 379
BSNT_04219___ 384 AAACAGCCATGCGGGCCAGCACAAGCTCGCGCTATCTG--TGGGGGAATC 431
..||| |.|||.|||||.||||.||| .|||.||.| |.|..|||||
BL00379___lyt 380 -GGCAG-CTTGCAGGCCACCACAGGCT--GGCTCTCAGCATTGACGAATC 425
BSNT_04219___ 432 GATTGTGATTGTGGATACGAAGGACATTATCTATGCGGGAACAGAAGATG 481
|||.||..|..|.|||.|..|.||.||..|.||.||.||...|||||..|
BL00379___lyt 426 GATCGTCGTGCTCGATCCCGATGAAATCGTATACGCCGGGTTAGAAGGCG 475
BSNT_04219___ 482 GTCATGTCAATGTAAAAACCTTCGATCATTCTTATACGG-TCAGCGATAC 530
|.||.||||..||.||.||.||.|||||..|.||.|||| ||| ||||||
BL00379___lyt 476 GACACGTCACAGTGAAGACTTTTGATCAGGCATACACGGTTCA-CGATAC 524
BSNT_04219___ 531 ACTCGTTGTGATTGAGAAAAAGCTGCCGGATGCTGATTTTATCCGTGTCC 580
|.|.|||||..|.||..|||||||..||.|..|.|..||.|||.|.||.|
BL00379___lyt 525 ATTGGTTGTACTCGAACAAAAGCTTTCGCAGACGGCATTGATCAGGGTGC 574
BSNT_04219___ 581 ATCGGAGCTTTGTCGTGAATACCGAATATATTAAAGAAATTCAGCCATGG 630
|..|.||.|||.|||..||||..||..||||||||.|..|..|.||.|||
BL00379___lyt 575 ACAGAAGTTTTCTCGCAAATATGGATCATATTAAACAGGTCAAACCCTGG 624
BSNT_04219___ 631 TTTAATTCAACGTATAATCTGATCATGAAAGACGGATCGAAAATACCGGT 680
||.|||||.||.||.||.||..|.|||||||||||.||.|..||.||.||
BL00379___lyt 625 TTCAATTCGACATACAACCTCCTGATGAAAGACGGCTCCACGATCCCTGT 674
BSNT_04219___ 681 CAGCCGGACATATGCGAAGGAATTGAAAAAGCTGCTCCATA---TTTGA 726
||||||.|||||.|||||.||..|||||||.|.|||.|||| |.|||
BL00379___lyt 675 CAGCCGTACATACGCGAAAGAGCTGAAAAAACGGCTGCATATGGTGTGA 723
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