Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04319 and BL00374
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence pep-align/BSNT_04319___rpsD.1.5803.seq
# -bsequence pep-align/BL00374___rpsD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04319___rpsD-BL00374___rpsD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04319___rpsD-BL00374___rpsD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04319___rpsD
# 2: BL00374___rpsD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 182/200 (91.0%)
# Similarity: 193/200 (96.5%)
# Gaps: 0/200 ( 0.0%)
# Score: 960.0
#
#
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BSNT_04319___ 1 MARYTGPSWKLSRRLGISLSGTGKELEKRPYAPGPHGPGQRKKLSEYGLQ 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BL00374___rps 1 MARYTGPSWKLSRRLGISLSGTGKELEKRPYAPGPHGPGQRKKLSEYGLQ 50
BSNT_04319___ 51 LQEKQKLRHMYGVNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYK 100
|||||||||||||||||||.|||||.|:||||||||||||:|||||:||:
BL00374___rps 51 LQEKQKLRHMYGVNERQFRNLFDKAAKMAGKHGENFMILLESRLDNIVYR 100
BSNT_04319___ 101 LGLARTRRQARQLVNHGHILVDGSRVDIPSYLVKPGQTIGVREKSRNLSI 150
||||||||||||||||||:||||||||||||.|||||||.:||||:|||:
BL00374___rps 101 LGLARTRRQARQLVNHGHVLVDGSRVDIPSYQVKPGQTISLREKSQNLSV 150
BSNT_04319___ 151 IKESVEVNNFVPEYLTFDAEKLEGTFTRLPERSELAPEINEALIVEFYSR 200
:||:||||||||||||||||||||:.|||||||||..|||||||||||||
BL00374___rps 151 VKEAVEVNNFVPEYLTFDAEKLEGSLTRLPERSELPAEINEALIVEFYSR 200
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