Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04313 and BL00372

See DNA alignment / Visit BSNT_04313 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence pep-align/BSNT_04313___hisJ.1.5803.seq
#    -bsequence pep-align/BL00372___hisJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04313___hisJ-BL00372___hisJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04313___hisJ-BL00372___hisJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04313___hisJ
# 2: BL00372___hisJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     174/270 (64.4%)
# Similarity:   204/270 (75.6%)
# Gaps:           2/270 ( 0.7%)
# Score: 936.0
# 
#
#=======================================

BSNT_04313___      1 MQKRDGHIHTPFCPHGSNDTLRQYAEEALKKGFESITFTEHAPLPPSFTD     50
                     |.|||||:|:|||||||.|..|.|.||..||||:|::|||||||||||.|
BL00372___his      1 MLKRDGHVHSPFCPHGSKDEFRYYIEELCKKGFQSVSFTEHAPLPPSFID     50

BSNT_04313___     51 PTPLKDSAMAQASLERYIHEISGLKKEYRGQLSIRTGLEVDYIAEFEDEI    100
                     |||.|||||..:.|.|||..::.||:||||||.|..|||||||..||.|.
BL00372___his     51 PTPEKDSAMPISQLGRYIERLTELKEEYRGQLDILIGLEVDYIRAFEHET    100

BSNT_04313___    101 TLFLDTYGPYLDDSILSVHFLRTDSSYLCLDYDEHTFKELISACGSIEAV    150
                     ..|||.||.:|||||||||||...|||:||||||..|::||...||.|.|
BL00372___his    101 KAFLDQYGTHLDDSILSVHFLPAGSSYICLDYDEKAFQQLIDCYGSTEQV    150

BSNT_04313___    151 YEQYYRSIYSSIVASLGVYKPKRVGHITLVQKFIKLFPYSMSEHIRGLVS    200
                     |..||..||||||:.||.:||||:|||||.:||:|||||:|||.:|..||
BL00372___his    151 YLAYYDEIYSSIVSPLGAFKPKRIGHITLAKKFVKLFPYTMSESVRKSVS    200

BSNT_04313___    201 LCLNAIEENGMELDFNTSGLRKTYAGGIYIEDWMLNEAKQKKIPLVFGSD    250
                     .||:...:.|:||||||:||||.|||.:|:|:||:.||:||.||||||||
BL00372___his    201 SCLDEAAKRGLELDFNTAGLRKPYAGNVYMEEWMIKEAEQKNIPLVFGSD    250

BSNT_04313___    251 AHQAGDVGYAYEAFLERC--    268
                     ||||.|.|:.||.|..|.  
BL00372___his    251 AHQAEDAGFGYEHFESRFVK    270


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