Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04223 and BL00360

See DNA alignment / Visit BSNT_04223 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_04223___ysaA.1.5803.seq
#    -bsequence pep-align/BL00360___ysaA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04223___ysaA-BL00360___ysaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04223___ysaA-BL00360___ysaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04223___ysaA
# 2: BL00360___ysaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     219/286 (76.6%)
# Similarity:   236/286 (82.5%)
# Gaps:          26/286 ( 9.1%)
# Score: 1156.0
# 
#
#=======================================

BSNT_04223___      1 MSLLAERFESEAEEKIMKAVFFDLDDTLLWDEKSVRTTFAETCLQAEKKY     50
                                     |||||||||||||||||||.|.|::|||:||:||
BL00360___ysa      1 ----------------MKAVFFDLDDTLLWDEKSVSTAFSKTCLKAEEKY     34

BSNT_04223___     51 GLDPEEFEAAVREAARELYMSYETYPYTVMIGINPFEGLWSNFSEPISEG    100
                     |:..||||||||||||:|||||||||||||||||||||||||||||||||
BL00360___ysa     35 GIHAEEFEAAVREAARKLYMSYETYPYTVMIGINPFEGLWSNFSEPISEG     84

BSNT_04223___    101 FQKLNKIVPEYRRNAWTNGLKALGIDDPAYGEYLGEFFAAERRKRPFVYD    150
                     ||||||||||||||||||||||.||||||:||.|||:|||.|||.||||:
BL00360___ysa     85 FQKLNKIVPEYRRNAWTNGLKAFGIDDPAFGEELGEYFAAVRRKSPFVYE    134

BSNT_04223___    151 ETFAVLDQLKGKYELLLLTNGDPSLQKEKLAGVPELAPYFNEIVISGAFG    200
                     |||||||:||||.||||||||||||||||||||||||||||||||||.||
BL00360___ysa    135 ETFAVLDELKGKVELLLLTNGDPSLQKEKLAGVPELAPYFNEIVISGEFG    184

BSNT_04223___    201 KGKPDVSIFEHCLKLMNIENDDAIMVGDNLNTDILGASRAGIKTVWINRT    250
                     |||||.|||||||.|:.:..|||:||||||||||||||||||:|||:||.
BL00360___ysa    185 KGKPDPSIFEHCLTLLGMTKDDAVMVGDNLNTDILGASRAGIQTVWVNRK    234

BSNT_04223___    251 DKKNETDVTPDYIISSLHDLFPILEK----------    276
                     .|||||||.||:.||.|.:||.||..          
BL00360___ysa    235 GKKNETDVAPDHEISHLSELFDILRGQAADKLSKKA    270


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