Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04210 and BL00355

See DNA alignment / Visit BSNT_04210 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence pep-align/BSNT_04210___ysdA.1.5803.seq
#    -bsequence pep-align/BL00355___ysdA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04210___ysdA-BL00355___ysdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04210___ysdA-BL00355___ysdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04210___ysdA
# 2: BL00355___ysdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 90
# Identity:      44/90 (48.9%)
# Similarity:    60/90 (66.7%)
# Gaps:           4/90 ( 4.4%)
# Score: 247.0
# 
#
#=======================================

BSNT_04210___      1 -MIIAAYLLLINLCGFWVMGIDKRKAQQHKWRISEDRLWLIAIVFGALGV     49
                      .:|..|::|||..||::|..||:||.:.|||:||.|:||:|..||:.||
BL00355___ysd      1 MTLIWIYMILINGYGFFLMKADKQKAVRGKWRVSERRIWLVAAAFGSAGV     50

BSNT_04210___     50 WLGMQTFRHKTKHASFKYGVPLLLVIEAILIAIYYSPFDL     89
                     |.||..|||||||.||:.|:|.||.::|:|...|...   
BL00355___ysd     51 WFGMMRFRHKTKHLSFRLGIPFLLGVQAVLTGFYMMN---     87


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